| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1920 |
|---|
| Symbol | |
|---|
| ID | 6281295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2163079 |
|---|
| End bp | 2163858 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642621486 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001895552 |
|---|
| Protein GI | 187923910 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0828208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.871832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTGA AGAAAACCCG TCTTTGGGTA TTGCTGGCTG CATTTGCAGC CGCACCTGCA
TTCGCACAGA ACATCGCCGT CGTGAACGGC ACGCCGATTC CCAAAGCACG CGCCGATGCG
CTGATCGACC AACTGGTTCA TCAAGGCCAG CAAAATACGC CGCAACTGCA GACCGCCGTG
CGCGAAGAAC TGGTGAATCG CGAGATCCTG ATGCAGGAAG CGCTGCGCCG CGGCCTGCCG
AATCGTCCGG ACATCAAGGC GCAAATCGCC GTTGCTCAGC AAACCGTCGT GCTGCGCGCG
CTGATCGAAG ACTTCGTGAA GAACAACACG CCGAGCGACG CCGAAGTCAC CGCGCGTTAC
AACGCGCTGA TCAAGGACGC GGGCGGCAAG GAATATCACC TGCACCACAT CCTCGTGGAC
AACGAACAGC AGGCCAAAGA CCTGATCGCG AAGATCAAGG CCGGCGCAAG CTTCGAAGAT
CTGGCCAAGC AATTCTCGAA AGACCCGGGA TCGGGCAAGA ACGGCGGCGA TCTGGACTGG
TCGGACCCGA AGGCCTACGT GCCTGAATTC GCGGACGCGG CCACGCATCT GCAGAAAGGC
CAGATGACCG ACACGCCGGT GCATACGCAA TTCGGCTGGC ACATCATCCG TGTCGACGAC
GTGCGCAACA TCACGCCGCC GCCGCTGGAG CAAGTGCGTC CGCAGATCGT GCAACAGATC
CAGCAGGAAA AGCTGCAGGC GTTCGAGGAA GGTTTGCGCA AGAACGCGAA GATTCAGTAA
|
|---|
| Protein sequence | MTLKKTRLWV LLAAFAAAPA FAQNIAVVNG TPIPKARADA LIDQLVHQGQ QNTPQLQTAV
REELVNREIL MQEALRRGLP NRPDIKAQIA VAQQTVVLRA LIEDFVKNNT PSDAEVTARY
NALIKDAGGK EYHLHHILVD NEQQAKDLIA KIKAGASFED LAKQFSKDPG SGKNGGDLDW
SDPKAYVPEF ADAATHLQKG QMTDTPVHTQ FGWHIIRVDD VRNITPPPLE QVRPQIVQQI
QQEKLQAFEE GLRKNAKIQ
|
|---|
| |