| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1907 |
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| Symbol | clpX |
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| ID | 6284619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2142832 |
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| End bp | 2144103 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642621471 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001895539 |
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| Protein GI | 187923897 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.173887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AGAAAGGTTC TAACAGCGAA AAGCTGTTGT ATTGCTCGTT TTGCGGTAAG
AGCCAGCATG AAGTCAAAAA ACTGATTGCC GGCCCGTCGG TGTTCATCTG TGATGAATGT
ATCGACCTGT GCAACGAAAT CATCCGTGAT GAGGCTGCAG GTGCGGGCAT CGAGGCGGGC
TTGTCGAAGT CCGATCTGCC GAGTCCGCAG GAAATCCGTG AAATCCTCGA CCAGTATGTG
ATCGGTCAGG AACGCGCGAA GAAAATTCTC GCGGTCGCGG TGTACAACCA CTACAAGCGC
CTCAAGCATC TCGACAAGAA GGACGAGATC GAGCTGTCCA AGAGCAACAT CCTGCTGATC
GGCCCGACCG GTTCCGGCAA GACGCTGCTC GCGCAAACGC TCGCGCGCCT TCTGAACGTC
CCGTTCGTGA TTGCCGATGC AACCACGCTG ACGGAAGCCG GCTATGTCGG TGAAGACGTC
GAGAACATCA TTCAGAAGCT GCTGCAAAAC TGCAATTACG AAGTCGACAA GGCCCAGCGC
GGCATTGTCT ACATCGACGA AATCGACAAG ATCAGCCGCA AGTCCGACAA CCCGTCGATC
ACCCGCGATG TCTCGGGTGA AGGCGTGCAA CAGGCTTTGC TGAAGCTGGT GGAGGGTACG
ATGGCGTCGG TGCCGCCGCA GGGCGGCCGT AAGCACCCGA ATCAGGACTT CATCCAGGTC
GACACCACCA ACATTCTGTT CATCTGCGGT GGCGCGTTCG ACGGCCTCGA AAAGGTCATC
GTCGATCGTA CCGAGAAAAC CGGCATCGGC TTTGGCGCGA GCGTGAAGAG CAAGCAGGAC
CGCGACGCCG GCGAAGTGCT GCGCGAAGTG GAACCGGAAG ATCTGATCAA GTTCGGTCTC
ATTCCCGAGC TGATCGGCCG TCTGCCGGTG GTAGCCACGC TCGGCAAGCT CGACGAAGTC
GCGTTGATGA AAATTCTCGT CGAACCGAAG AATGCCCTGG TTAAGCAGTA CCACAAGCTG
TTCAACATGG AGCGCGTCGA GCTCGAAATT CGCCCGGCCG CGTTGCAAGC TGTCGCGCGT
AAGGCAATTC GTCGCAAGAC GGGCGCGCGT GGTTTGCGTT CTATCCTGGA ACAGGCGTTG
CTTGATGTGA TGTACGACCT GCCGCAAATG AAAGGCGTTA GCAAGGTCAT CATCGACGAC
AACGTGATTG ACGGCGACGG CAAACCGCTA CTGATCTACG AAGACGCGCC CAAAGTGGCG
GGTTCGAACT GA
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| Protein sequence | MADKKGSNSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EAAGAGIEAG
LSKSDLPSPQ EIREILDQYV IGQERAKKIL AVAVYNHYKR LKHLDKKDEI ELSKSNILLI
GPTGSGKTLL AQTLARLLNV PFVIADATTL TEAGYVGEDV ENIIQKLLQN CNYEVDKAQR
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLVEGT MASVPPQGGR KHPNQDFIQV
DTTNILFICG GAFDGLEKVI VDRTEKTGIG FGASVKSKQD RDAGEVLREV EPEDLIKFGL
IPELIGRLPV VATLGKLDEV ALMKILVEPK NALVKQYHKL FNMERVELEI RPAALQAVAR
KAIRRKTGAR GLRSILEQAL LDVMYDLPQM KGVSKVIIDD NVIDGDGKPL LIYEDAPKVA
GSN
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