| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1890 |
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| Symbol | |
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| ID | 6284750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2122689 |
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| End bp | 2123861 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621454 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001895522 |
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| Protein GI | 187923880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.125592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.229246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACA CGACCGACAT CCAGCAGGCC GATGTCCTCG TGATCGGCGG CGGCCTGCAC
GGCACGAGCA GCGCGTTCCA TCTGGCGCGG CGCGGCGTGA AGGTCATTGT GCTCGAAGCC
GATTATGTGG CGCGTCATGC CTCGGGCGTG AACGCGGGCG GCGTACGCAC GCTGGGCCGC
CCGTTGCCCG AAATTCCGCT CGCGCTGATG TCGCGGGAAA TCTGGCACGG CATGAGCGAG
CTGCTCGGCG AGAACGGCGG CTTCGTGGCA TCCGGCCAGT TGAAGATCGC CGAAACCGAT
GAAGAACTGG ACGCGTGCCG GCAGCGCGTC GCGCTGCTCG AAGCGCATGG ATTTACGCAC
GAGAAGGTGA TCGACCGCGA GACCGTGCTC GAACTCGAAC CGGCGCTCGC GCGGCATGTT
ACCGGCGGCA TCTGGGTCGA GCACGACGGT TACGCGCTGC CTTATCGAAC CACCACGGCC
TTTCGGCTCG CCGCACAGCG GCTCGGCGCG CGCTTTCTGG AAGGCGCGCC GGTGCGCCGC
ATCGAGCAAC GCGGCACGAG ATGGTTCGCC GTCACGCCGC ACGGCACGTT CAGCGCAAGC
CAGTTGCTCG TCACCGCGGG CGCATGGTCC GGCGAGTTGG CGAGGCAGGT CGGCGAGAGC
GTGCCGGTGC ACCCCGAAGG TTTGATGCTG ATGGTCACGC AACGCGTGGC GCCCTTCTGT
CGCGCGACGC TCGGGGCAAC AGGCCGGCCG TTGTCCTTCA AACAGTTCGA TAACGGCACG
GTGGTGATCG GCGGCAAACT GATCGGCATT GCCGATCTGG CGAATCGTCA CGGCGAGGTC
GATTTTGCCC GCCTCGTGCG CAGCGCGCGA ACCGTGACCG ATCTGTTTCC TCATTTGCGC
CATCTCGGCG TGAACCGTGC GTGGGCCGGT GTCGAAGCTT TTACGGAAGA TGAACTGCCA
GTCATTTCCG CGAGCCGCAA GGCGGCAAAT CTGTATTACT CGTTCGGCTA TTGCGGCAGC
GGTTTTCAGC TCGGACCGGG TTGCGGCAAG CTCGTGTCCG AGTTGATGCT GGACGGCAAG
CCCTCGCTTT CGCTCGATGC GTTTGCCGTC GATCGTTTTG GCCGCGCGGC AGCGGCTTCC
CCCCCTGGCG CTTCGCATCT GGTTGCGCAC TAA
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| Protein sequence | MSDTTDIQQA DVLVIGGGLH GTSSAFHLAR RGVKVIVLEA DYVARHASGV NAGGVRTLGR
PLPEIPLALM SREIWHGMSE LLGENGGFVA SGQLKIAETD EELDACRQRV ALLEAHGFTH
EKVIDRETVL ELEPALARHV TGGIWVEHDG YALPYRTTTA FRLAAQRLGA RFLEGAPVRR
IEQRGTRWFA VTPHGTFSAS QLLVTAGAWS GELARQVGES VPVHPEGLML MVTQRVAPFC
RATLGATGRP LSFKQFDNGT VVIGGKLIGI ADLANRHGEV DFARLVRSAR TVTDLFPHLR
HLGVNRAWAG VEAFTEDELP VISASRKAAN LYYSFGYCGS GFQLGPGCGK LVSELMLDGK
PSLSLDAFAV DRFGRAAAAS PPGASHLVAH
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