Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1877 |
Symbol | |
ID | 6283399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2109658 |
End bp | 2110206 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642621440 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001895509 |
Protein GI | 187923867 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00595547 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.326484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG TCGGCGATAA AGTTGAAGCG TTCACCGTCA CGGCCGCGAA GCCGGGCTTC AACCATCATG AAGAGAACGG CATTTCGGCA TTCGAAGACA TCACGGAGCA GTCGTTTCCG GGCAAATGGA AGATCATCTA TTTCTACCCG AAGGATTTCT CGTTCCTGTG TCCGACGGAG ATCGTCGAGT TCGGCAAGCT GGCGAGGGAT TTTGAAGACC GCGACGCGGT GTTGATGGGC GGCAGCGTCG ACAATGAATT CGTGAAGCTG GCATGGCGCC GTGAGCTCAA GGACCTGAAC AAGCTCAATC ACTATGCCTT CGGCGACGTG AAGGGCGAGC TGATCGACCA GCTCGGTGTG CGCGACCAGG AAGCGGGTGT CGCGTTGCGC GCCACCTTTA TCATCGATCC GGACAACACG ATCCAGCATG TGTCGGTGAA CAACCTGAAC GTGGGCCGCA ATCCGGAAGA AGTGCTGCGG ATTCTGGACG CCCTGCAAAC GGACGAGCAG TGTGCCTGCA ACCGCCCGAT CGGCGGCGCC ACGCTCTGA
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Protein sequence | MKTVGDKVEA FTVTAAKPGF NHHEENGISA FEDITEQSFP GKWKIIYFYP KDFSFLCPTE IVEFGKLARD FEDRDAVLMG GSVDNEFVKL AWRRELKDLN KLNHYAFGDV KGELIDQLGV RDQEAGVALR ATFIIDPDNT IQHVSVNNLN VGRNPEEVLR ILDALQTDEQ CACNRPIGGA TL
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