Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1848 |
Symbol | rimO |
ID | 6281781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2075400 |
End bp | 2076785 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621411 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_001895480 |
Protein GI | 187923838 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0225494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.052969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCCA CACCCCCGAT TGTCCCGACT GCCACGCCGA AGGTCGGATT CGTTAGCCTC GGCTGCCCGA AAGCCCTGGT CGATTCCGAG CAGATCATCA CTCAACTGCG CGCCGAAGGT TACGAGATTT CCGGCACGTA CGACGGCGCG GACCTCGTGG TCGTCAACAC CTGCGGCTTC ATCGACGAAG CAGTGCAGGA AAGTCTCGAC GCGATCGGCG AAGCGCTCAA CGAAAATGGC AAGGTGATCG TGACCGGCTG TCTCGGCGCT AAGAAAAGCG CGAGCGGCTC GGGGCTGATC GAAGAAGTGC ATCCGAAGGT GCTGGCCGTG ACCGGCCCGC ACGCGCTCGG CGAAGTGATG CAACACGTGC ACACTCATCT GCCGAAGCCG CACGATCCGT TCGTCGACCT GGTGCCGGCC GCCGGCGTGA AGCTCACGCC GCGCCATTAC GCGTACCTGA AAATTTCCGA AGGCTGTAAC CACCGCTGCA CGTTCTGCAT CATCCCGTCC ATGCGCGGCG ACCTCGTGTC GCGCCCCGTT GCCGACGTGA TGCTCGAAGC GGAAAACCTC TTCAAGTCGG GCGTAAAAGA ACTGCTGGTG ATTTCGCAGG ACACGAGCGC CTATGGCGTC GACGTCAAAT ACCGCACGGG TTTCTGGAAC GGCAAGCCGA TCAAGACGCG CATGACCGAT CTGGTCGGCG CGCTCGGCGA ACTCGCCGCG CAATACGGCG CGTGGGTGCG TCTGCATTAC GTGTATCCGT ATCCGAGCGT CGACGAAGTG ATTCCCATGA TGGCCGAAGG CCCGTACAAG GGCCACGTGC TGCCGTACCT CGACGTGCCG TTCCAGCACG CGCATCCGGA AGTGTTGAAG CGCATGAAGC GCCCGGCCAA CGCCGAGAAG GTGATGGAGC GCGTGAAGAA ATGGCGCGAG ATGTGCCCGG ATCTGACCAT TCGCAGCACG TTCATCGCGG GCTTCCCGGG TGAGACTGAA GAGCAATTCC AGACGCTGCT CGATTTCATC CGCGAGGCGG AACTGGATCG CGTGGGCTGC TTCGCCTATT CGCCGGTCGA AGGCGCGACG GCTAACGAAC TCGACGGCGC CTTGCCCGAC GAAGTGCGCG AAGAACGCCG CGCGCGTTTC ATGGAAGTCG CCGAAGAAGT GTCGGCCAAG CGTATCGCGA AGAAGGTCGG CAAGACGCTC AAGGTGCTGG TCGACGAGAT CAACGCGGAC GGCGGCATCG GCCGCACCGC GGCTGACGCG CCGGAGATCG ACGGCGTCGT GTATATCGCG CCGGCTGCGA AGGCGTCGAA GCGCTACAAG GTCGGCGATT TCGTGTCGGT GAAGATCACC GGCGCCGACG GTCACGACCT GTGGGGCGAG GTGTAA
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Protein sequence | MSATPPIVPT ATPKVGFVSL GCPKALVDSE QIITQLRAEG YEISGTYDGA DLVVVNTCGF IDEAVQESLD AIGEALNENG KVIVTGCLGA KKSASGSGLI EEVHPKVLAV TGPHALGEVM QHVHTHLPKP HDPFVDLVPA AGVKLTPRHY AYLKISEGCN HRCTFCIIPS MRGDLVSRPV ADVMLEAENL FKSGVKELLV ISQDTSAYGV DVKYRTGFWN GKPIKTRMTD LVGALGELAA QYGAWVRLHY VYPYPSVDEV IPMMAEGPYK GHVLPYLDVP FQHAHPEVLK RMKRPANAEK VMERVKKWRE MCPDLTIRST FIAGFPGETE EQFQTLLDFI REAELDRVGC FAYSPVEGAT ANELDGALPD EVREERRARF MEVAEEVSAK RIAKKVGKTL KVLVDEINAD GGIGRTAADA PEIDGVVYIA PAAKASKRYK VGDFVSVKIT GADGHDLWGE V
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