| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1841 |
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| Symbol | |
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| ID | 6281480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2066389 |
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| End bp | 2067684 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621404 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001895473 |
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| Protein GI | 187923831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.482122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.168334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT CAAATACTCC AGGTACCGCA ACCGGTGCCG GGAATAGCAA CAAAGATTAT
AGCGTAAGCG CTGACCCCTC CGACGCGTTG GGCGTCGATT CCCTCGACGA CGATCTCGGC
AGCGACGCGC TCGCCGCCGC CGCTCTGCCC AGCCATGTGC CGACCGTGGC GAGCCGCGTG
GCGGACGAAA CGCCGCGCAG CGTCGTCGTG CCCGACGAGT TGGCCGGCGA GCGCCTCGAC
AAGGTGCTCG CGCGGGTTTT TCCCGAGTTC TCGCGCAATC GCCTGCAAAG CTGGATCGAG
GCCGAGCGCG TGCGGATCGA CGGCAAGCCC GCGAAAATCC GCCAGCCGGT GCCGCTCGGC
GCGACCATCG AGCTCGTGCC GGATCTGCTG CCCGAACAGC TCGCGTTCAC GCCGGAGCCG
GTGCCGCTCG AAATCGTCTA TGAAGACGAC ACGCTGGTGG TCATCAACAA ACCGGCCGGC
ATGGTCGTGC ATCCGGCGGC CGGCAACTGG AGCGGCACGG TGCTCAACGG CCTGCTGTAC
CGCTACGGCG ACGCCGCCGC GGGCCTGCCG CGCGCGGGCA TCGTGCATCG GCTCGACAAG
GAAACCTCCG GTCTGATGGT GGTGGCGCGC ACGCTCGAGG CGCAGACCGA CCTTGTGCGC
CAGTTGCAGG CGCGCACGGT GAAGCGCCGT TATCTCGCGC TGGTGTGGGG CAACATGCCC
GAAGAAGGCA CGATCGACGC GCCGATCGGC CGCGATCCGC GCGAACGCAC GCGCATGGCC
GTGGTCACGA GCGCGTCGGG CAAGCCCGCG CGCACGCATT TCCGGCGCGT GGATTCGGCG
ATCTGGCAGC GTCAGCCGGT GACCGCGATT CATTGCGATC TGGAAACCGG GCGCACTCAT
CAGATTCGCG TGCATTGCGC GCACATTGGT CATCCGCTGC TCGGCGATCC GGTGTATGGG
CGCGCGCGCG GCAAACGCTC GGTCACGCCG CTGCCCGACG GTTTCGCGCG CCAGGCGCTG
CATGCATGGC GCCTCGGCCT GATCCATCCG CAGACCGGCC GCACGATGCA ATGGCGTGCC
GATGCGCCGG CCGATATGGA GGCGCTGTCG GCGGCGCTCG GCCTCGGCCG CGACGACGCG
GGCGAGTTCG ACGAGACGTA CTACGAGGAA GACGACTACG ACGCGTCGCT CGACGAGGAC
GCCGATGAAG ACGGCGCCTT CGATCACGAC GACGCCGACG ATGAAGCCGA CGACCACGGC
GACCACGACG ATCACAACGA GGACGACCAC GCATGA
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| Protein sequence | MTRSNTPGTA TGAGNSNKDY SVSADPSDAL GVDSLDDDLG SDALAAAALP SHVPTVASRV
ADETPRSVVV PDELAGERLD KVLARVFPEF SRNRLQSWIE AERVRIDGKP AKIRQPVPLG
ATIELVPDLL PEQLAFTPEP VPLEIVYEDD TLVVINKPAG MVVHPAAGNW SGTVLNGLLY
RYGDAAAGLP RAGIVHRLDK ETSGLMVVAR TLEAQTDLVR QLQARTVKRR YLALVWGNMP
EEGTIDAPIG RDPRERTRMA VVTSASGKPA RTHFRRVDSA IWQRQPVTAI HCDLETGRTH
QIRVHCAHIG HPLLGDPVYG RARGKRSVTP LPDGFARQAL HAWRLGLIHP QTGRTMQWRA
DAPADMEALS AALGLGRDDA GEFDETYYEE DDYDASLDED ADEDGAFDHD DADDEADDHG
DHDDHNEDDH A
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