Gene Bphyt_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1791 
Symbol 
ID6282705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2010016 
End bp2010642 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content56% 
IMG OID642621354 
Productprotein of unknown function DUF47 
Protein accessionYP_001895423 
Protein GI187923781 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0557964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC GATTCATGCC CACCGAGGGC AAGTTCTTTG AAATTTTCAA TGCGCACGCA 
ACGTGCATCG TCTCGGCAAG CCGCGAACTC GAGCTGCTGA TCGACAACCT GCAGGACGCC
GAGACTCATA AGCAAAACGT GCAGAAAGCC GAGAAGGCCG CTGACAAGCT CACGCACGAA
ACCATCGACC TGCTGCACAA GACGTTCATC ACGCCGCTCG ACCGTGACGA GATCCACAAG
CTGATCACCA CGATGGACGA CATCCTCGAC CTGATGGAAG ACGTCGCCAC CGCAATTTCG
CTGTATGACG TGCAAGCCGT GACCTCCGAG GCGAGCCAGT TGGCGCATAT CTGCACGGCA
ACCTCCGAGC GCGTGCAGTT CGCGGTGAGC CTGCTGTCCG ACATGAAGCA GGCGAGCCAG
ATTCTGAAGG CCTGCGAAGA CATCGACCGT CTGGAATCGG AGGCCGATCG CGTGCTGCGC
TCGGCCATGT CGAAACTGTT CCGCGAAGAA GACAACGTCA AGACCCTGAT CAAGCTCAAA
GCGATCTACG AATTGCTCGA AACGATCACG GACAAGTGTG AAGATGTAGC GAACATCATC
GAAGGCATCG TGCTGGAAAA CGCATAA
 
Protein sequence
MFGRFMPTEG KFFEIFNAHA TCIVSASREL ELLIDNLQDA ETHKQNVQKA EKAADKLTHE 
TIDLLHKTFI TPLDRDEIHK LITTMDDILD LMEDVATAIS LYDVQAVTSE ASQLAHICTA
TSERVQFAVS LLSDMKQASQ ILKACEDIDR LESEADRVLR SAMSKLFREE DNVKTLIKLK
AIYELLETIT DKCEDVANII EGIVLENA