Gene Bphyt_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1783 
Symbol 
ID6284629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2003850 
End bp2004764 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID642621346 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001895415 
Protein GI187923773 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0476809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.294417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCT TCAAACAGAT CGAAACCTTC GTGCGCGTCG CGGATGCCGG CAGCCTTGCG 
GCGGCCGCGC TGGAGGAGGG CGTGTCGCCG GTGATTCTCG GCCGGCGCAT CGACGCGCTG
GAAAAGCGCC TCGGCGTGAA ACTCATGTAC CGCTCGACGC GCCGGCTCGT GGTCAGCGAA
GACGGCGCCG CGTTTCTGGA GCGCTGCCGG GGTCTTCTCA CCGAATGGGA TCAGGCGGAA
AACGAACTGA GCGCCGGGCG GCGCGCGGTC AACGGCCATC TGATCGTGTC GGCGCCGGCC
GCGTTTGGGC GCAAACACGT CGCACCGCTC GCGCCGGTGT TTCTCGCCGA CAAGCCGGAA
TTGCAGGTGT CGTTCAATCT GACCGACCGG GTGGTGGATC TGGTGCGCGA AGGTTACGAC
CTGTCGATCC GCATAGGCGG CGCGGTGGAT CCGAACTTCG TGGCGGTCAA GCTGGCGTCG
AACCGGCGGG TGGTGTGCGG CACGCCGGAG TATTTTCGCC AGCACGGCAG GCCGAAAACG
CTCGAAGACC TGCCGCAGCA CAACTGTCTC GCATTCAATC TTCAAGGCGG ACAGAACCGC
GGCTGGTATT TCCGCCGCAA CGGCAAGCTG GCGACGGTGC GGGTGGGCGG CACGCTCGAC
TGCAACGACG GTGAATTGCT GCACCGCTGG GTATCGGAAG GTCTCGGGCT CGGCTGGCGC
TCCACGTGGG AGATCCAGCA GCAGCTGGCG CGCGGCGAGC TGGAAACCGT GCTCGACGAG
TTCGCGCTGC CCGACTACGA CATTCTCGCC GTCTACCCGC AGCAGCGGTA TGTGCCGGCC
AAGGTGCGGT ACTTCATCGA TTATCTGAAA GAGGTCTACG CGAGCGAGGA TTACTGGAAC
CGGCCGGCTT ACTAG
 
Protein sequence
MDRFKQIETF VRVADAGSLA AAALEEGVSP VILGRRIDAL EKRLGVKLMY RSTRRLVVSE 
DGAAFLERCR GLLTEWDQAE NELSAGRRAV NGHLIVSAPA AFGRKHVAPL APVFLADKPE
LQVSFNLTDR VVDLVREGYD LSIRIGGAVD PNFVAVKLAS NRRVVCGTPE YFRQHGRPKT
LEDLPQHNCL AFNLQGGQNR GWYFRRNGKL ATVRVGGTLD CNDGELLHRW VSEGLGLGWR
STWEIQQQLA RGELETVLDE FALPDYDILA VYPQQRYVPA KVRYFIDYLK EVYASEDYWN
RPAY