Gene Bphyt_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1772 
Symbol 
ID6280959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1991280 
End bp1991930 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID642621335 
ProductLexA repressor 
Protein accessionYP_001895404 
Protein GI187923762 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TCACCGCACG ACAGCAGCAG GTTTTCGATC TGATCCGCAG GGCTATCGAA 
CGCACCGGCT TTCCGCCCAC CCGCGCGGAG ATCGCCGCCG AACTGGGTTT CAGCTCGGCC
AACTCCGCAG AAGAACATCT GCGCGCGCTC GCTCGCAAGG GCGTGATCGA ACTCGCGGCC
GGCGCATCGC GCGGCATTCG CCTGCTGGCC GGTCCGGAAG ACTCGCCGCA CCAGTTCACC
CTGCCGCACG CCAGCATCAT GCAACTGTCG CTGCCGCTGA TCGGGCGCGT CGCCGCCGGC
AGCCCGATCC TCGCGCAGGA ACATATCTCG CAGCACTACG CCTGCGACCC GGCGCTGTTC
TCGAGCAAGC CGGATTACCT CCTGAAAGTG CGCGGGCTGT CCATGCGCGA CGCGGGCATC
TTCGACGGCG ACCTGCTCGC GGTGCAAAAG CGCAGCGAAG CGAAAGACGG CCAGATCATC
ATTGCCCGGC TCGGCGACGA CGTCACGGTC AAGCGCCTGA AGCGCCGGCC GAACGGGCTC
GAACTGATCG CCGAGAACCC CGATTACGAA AACATCTTCG TTGAAACCGG CAGTGCGGAA
TTCGCGCTGG AGGGCATCGC CGTGGGGCTC ATTCGCCCCG GCGAGTTCTA A
 
Protein sequence
MTKLTARQQQ VFDLIRRAIE RTGFPPTRAE IAAELGFSSA NSAEEHLRAL ARKGVIELAA 
GASRGIRLLA GPEDSPHQFT LPHASIMQLS LPLIGRVAAG SPILAQEHIS QHYACDPALF
SSKPDYLLKV RGLSMRDAGI FDGDLLAVQK RSEAKDGQII IARLGDDVTV KRLKRRPNGL
ELIAENPDYE NIFVETGSAE FALEGIAVGL IRPGEF