| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1740 |
|---|
| Symbol | |
|---|
| ID | 6284544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1964979 |
|---|
| End bp | 1965977 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642621302 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001895372 |
|---|
| Protein GI | 187923730 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.377476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGA CAGGCAAGGT GGGTTTATTC GGCGCCGCGG GCGCGGCCGG CCAGGTCATC
GCGGCGGCGC TCAGCGCGGC GGGTCGCGAT TACCGCGTGG TCGGCCGTTC GCGTCAGCCG
CTCGAGGCCG CGTTCGGCCA CGATCCGCAC GCCGAGATCG TCACGTGGAA TCCGGACGAC
CCCGCCTCGA TCCGCGCGGC GTCCCAAGGT CTGCAAACGG TGATCTATCT GGTCGGCGTG
CCCTACGACC AGTTCGCCGC GCATCCGCCG CTCATGGAGA GAACGCTTGC GGGCGTGACG
GCGGCGGGCG TCGAACGCTT CATTCTGATC GGCACGGTGT ATCCGTACGG CCGCGCGCGC
GGCAACCCGG TCCGCGAAGA TCATCCGCGG CAGCCGCACA CGTTCAAGGG GCAAATGCGC
CTCGCGCAGG AAAACCTGGT GCTGGCGGCG CATGGCCACA ATGGCCTCTC GACGCTCGTG
CTGCGCCTGC CCGACTTCTA CGGCCCGAAT ATCGAGCGCA GCCTGCTGAA CGGCGTGTTC
GAAGCCGCGG CAAACGGCAA GCGCGCGCAG GTGATCGGGC CTGCGGATGT GCCGCATGAA
TTCATCTATC TGCCGGATAT CGGGCCGGTG GTCGAAAAGC TCACGCGCAC GCCCGAGGCA
TATGGACGCT GGTGGCACCT CGCCGGCGCG GGGACCATCA CGCAGCGCGA AGTGGCACGG
CAGGCCTATG CGCTGGCGGG CCGCCAACCC AAGCTGATGG TGGCCGGCAA GACGCTGCTG
CGCGTGCTCG GCCTGTTCAA TCCGTTGATG CGGGAACTGG TGGAAATGAA TTACCTGATG
ACCGAACCGC TCGTGCTCGA CGACTCGGCG TTGACCGAAC TGATTGGCCC GATCGCCAGA
ACGTCCTACG AAGAAGGGAT CCGCCATGCA TTCGATGCCG CGCGCGAAGC GGCATCGGCG
AATGCGGGAG CAAACGGCAG CGCCGCGAGC GCGGTTTGA
|
|---|
| Protein sequence | MQETGKVGLF GAAGAAGQVI AAALSAAGRD YRVVGRSRQP LEAAFGHDPH AEIVTWNPDD
PASIRAASQG LQTVIYLVGV PYDQFAAHPP LMERTLAGVT AAGVERFILI GTVYPYGRAR
GNPVREDHPR QPHTFKGQMR LAQENLVLAA HGHNGLSTLV LRLPDFYGPN IERSLLNGVF
EAAANGKRAQ VIGPADVPHE FIYLPDIGPV VEKLTRTPEA YGRWWHLAGA GTITQREVAR
QAYALAGRQP KLMVAGKTLL RVLGLFNPLM RELVEMNYLM TEPLVLDDSA LTELIGPIAR
TSYEEGIRHA FDAAREAASA NAGANGSAAS AV
|
|---|
| |