| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1726 |
|---|
| Symbol | |
|---|
| ID | 6281297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1954297 |
|---|
| End bp | 1955343 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642621287 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_001895358 |
|---|
| Protein GI | 187923716 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACA ATAGCGCCTG TTCTGAACCG CATGGACTCG AAGGAACGAT GACAATCGCA
ACGCAGGAAA TCCCCCCGGA CGGCACGATC CGCTGGGGAA TCGTCGGGAC GGGCCGCATT
GCCCGTCGCT TCGCGGCAGG TCTCGCTCAT GTGCCGCACG CGCAACTAAC CGCGCTGTGG
TCGCGCCGCG CGGAGCCGGC CGTGGCATTC GCCGGGGAAT TCGGCGGCGA GGTGTGCGCG
AGTTTCGACG CGCTGCTCGC GAGCGGTATC CACGCGATCT ATATCGCCAC CGTCCAGGAC
AGTCACGCCG ACTACGCGAT CGCCGCGCTG CAAGCCGGTC TGCACGTGCT GTGCGAAAAA
CCCGCCACCA TCAATCAGCC GCAACTCGAG CGCGTGCTCG ACGCCGCGCG CGACGCGCAG
CGGCTCTTCA TGGAAGCCAT GAAGCCGCCC TTTTATCCGC TCTACAGAAA GTTGCGCGCG
CATCTAGATG CCGATCCGAT CGGCGCGGTC GGGCTGGTGC GGGCCGGCTG CTCGGTGCCG
GGCGTACCGG ACGATCATCC TTCGCTGTCG TTCGAGCATG CGGGCGGCGC GTTGCTCGAC
ATTGGTATCT ACGAGATGTT TCTCGCCGTC GACTGGCTGG GCGCGCCGCT CGAGGTGCAG
ACGCTTGGGC GGCTCGGGGC GACGGGTGTC GATACGTTCG CGAGCCTGAA CAGCCGGCAC
GAGAGCGGCA TCGCCCAGTT GTTCTGCGGG CTCGATCTGC ACGGCAAGGG CGATGCGCTG
CTGATGGCCA AAGGGGGCCA CGTCACGATT CATGAGCCAT GGTGGAATCC GTCGCGCGCG
ACGATCCGCT ATACCGATGG ACGCGTGGTC GAACTCGACG AACCGTTCGA AGGCGGCGGC
CTGAACTACG AGACCGCGCA CTTCTGCGAA CTGATCCGGG CGGGGAAAAT GGAAAGTCCG
GTCATGCCGC ACGCCAGGTC GCTGCAGATG ATCGCGATGG CCGACGCGGC GCGCGCGGCG
CTCGGGTTGA AGTTCGCGGG AGAGTAG
|
|---|
| Protein sequence | MRDNSACSEP HGLEGTMTIA TQEIPPDGTI RWGIVGTGRI ARRFAAGLAH VPHAQLTALW
SRRAEPAVAF AGEFGGEVCA SFDALLASGI HAIYIATVQD SHADYAIAAL QAGLHVLCEK
PATINQPQLE RVLDAARDAQ RLFMEAMKPP FYPLYRKLRA HLDADPIGAV GLVRAGCSVP
GVPDDHPSLS FEHAGGALLD IGIYEMFLAV DWLGAPLEVQ TLGRLGATGV DTFASLNSRH
ESGIAQLFCG LDLHGKGDAL LMAKGGHVTI HEPWWNPSRA TIRYTDGRVV ELDEPFEGGG
LNYETAHFCE LIRAGKMESP VMPHARSLQM IAMADAARAA LGLKFAGE
|
|---|
| |