| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1695 |
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| Symbol | |
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| ID | 6283490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1921218 |
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| End bp | 1922756 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621255 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001895328 |
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| Protein GI | 187923686 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA GCGACTTCTC CCTGCGCACA CCGGCGCTCG CGCTGCTGCT GTGCTCGATG
CTCACGGGCT GTCTGGTGGG CCCGAACTTC GAACCTCCGC AGACGGCCAC GCCCGACGTG
TTCAACCGCA CCCGGAGCGC ACAGGCCGCA AGCAAGGCCG TCGAGTCCGG ATTCACACCG
CAATGGTGGA CGCTGTTCAA CGATCCGATA CTGGACTCGC TGGAACAGCA GCTGAGCGAT
GCGAATCTCG ATGTGGCGGC CGCATCGGCG CGTCTGCGGC AAAGCCGGGC GCAACAGCGC
ATTGCCGGCG CCGAAGAGTA TCCGACGCTC AATGGCGCCG CCTCTTACGA CCGCGAGCGC
GGCAGTCCGA ACGGCATCCT CTCGCTGCTT GGCGTCACGC CGACAGGAAG CCAGACGCAG
TCGGCCTCGG GCAGTGCACC GCTCGGTGTC GCGCCGTTGC CGGGCGCCAA GGGCTCGCCC
GCTTACGATC TGTACCAGTT CGGCTTCGAC GCGTCATGGG AACTCGACTT CTGGGGGCGC
GTACGACGCG GTGTCGAGGC CGCGTCGGCG CTCTCCGATG CATCGTACGA GGACCGTAAC
GCGATCCTGC TGTCCGCGCG CGCCGAACTC GCGCGCGACT ACATCCAGTT GCGCGACACG
CAGGCCCTGC TGCAGATCGC GAAGCAGAAC CTCGACATCG CTCACGACGC CACCAAGCTC
ACGCAAAACC GGGTGCATGA AGGCGTGACG ACGGACCTGG ACGTGGCCAA CGCGATGGCG
CAGGCGGAGT CGATCGAAAG CCTGATCCCG ACGCTCGAAT CGCGCAACAC GACCACGATC
AATGCGATCG GCGTGCTGCT GGCGAAAGAA CCGGGCGCAT TGCAGCAGAT GCTCGCCGAG
CCGCACGATG TGCCGGCGCT GCCCGATCAG GTGCCAATTG GCGTTCCGTC GGAACTGGTG
CAGCGCCGGC CCGACATCCG CAAAGCCGAG GCCCAGCTGC ATGCGGCCAC CGCGACGATC
GGCATGGCGA AGGCCGACTT CTATCCGCGC ATTTCGCTCA ACGGCAGCGC CGGGTTCCAG
AGCCTGCAAC TGTCGAATCT CGCCGACTGG GCGTCCGGCC AGTTTGTCGT GGGACCGTCG
ATCACGCTGC CGATATTCGA AGGCGGACGC CTCAAAGGCA CGCTTCATTT GCGCGAGGCG
CAGCAGCAGG AAGCGGCGAT TGTCTACCAG CACACCGTGC TTCAGGCATG GCGTGAGGTG
GACGACGCGC TGGTCGTCTA CGACGCCGAA CAGCGGCGGC GCGACCGGCT GAAAACGGTC
GTGAGTCTGA ACCAGCGCGC GCTGTCGATT GCACAGCAAC GGTACAAGGC GGGTGCGGTG
AATTTCCTGG ATGTGCTGAA CGTGCAGAAA CAGTTGCTCG ATGCGCAGAG CAAACTCGAG
CAGAGCAAGG CCGACGCCGA CGCGAACCTC ATCACGCTGT GCAAGGTGCT CGGTGGTGGA
TGGGAATCGA CGTATGCCGG GCAGGACAGT TCTCGTTGA
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| Protein sequence | MNASDFSLRT PALALLLCSM LTGCLVGPNF EPPQTATPDV FNRTRSAQAA SKAVESGFTP
QWWTLFNDPI LDSLEQQLSD ANLDVAAASA RLRQSRAQQR IAGAEEYPTL NGAASYDRER
GSPNGILSLL GVTPTGSQTQ SASGSAPLGV APLPGAKGSP AYDLYQFGFD ASWELDFWGR
VRRGVEAASA LSDASYEDRN AILLSARAEL ARDYIQLRDT QALLQIAKQN LDIAHDATKL
TQNRVHEGVT TDLDVANAMA QAESIESLIP TLESRNTTTI NAIGVLLAKE PGALQQMLAE
PHDVPALPDQ VPIGVPSELV QRRPDIRKAE AQLHAATATI GMAKADFYPR ISLNGSAGFQ
SLQLSNLADW ASGQFVVGPS ITLPIFEGGR LKGTLHLREA QQQEAAIVYQ HTVLQAWREV
DDALVVYDAE QRRRDRLKTV VSLNQRALSI AQQRYKAGAV NFLDVLNVQK QLLDAQSKLE
QSKADADANL ITLCKVLGGG WESTYAGQDS SR
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