| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1676 |
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| Symbol | fadE |
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| ID | 6284356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1894148 |
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| End bp | 1896646 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621237 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001895310 |
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| Protein GI | 187923668 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.761188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.240314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGGT TTATCCTGGT GTTAGTGATT GCCGCCTTCG CGCTCGTCTA CGTTCAGGCG
CGCGCGGCAT GGTGGCTGGC CTTCATGATC GTCTGGGTGG CGGCCGCGCA TGTCAGCGGA
GCGGCGGGTC CGGTGGCCAC CACGCTGCTC GCCATCGTCT TCGTCCTCCC CGCCCTCGTG
CTCGCGCTCA AACCGCTGCG GCGCACGTGG TTCGCCAAGC CCGTGCTCGA CATCTTCCGC
AAGATCCTGC CGGAGATGTC GCCGACCGAG CGCGACGCGA TCGAAGCCGG CACGGTCTGG
TGGGACGCCG AACTGTTCTC CGGGCGTCCG CACTGGGACA AGCTGCTCGG CTACGGCCCC
GCCACGCTGA CTGCGGAAGA ACAGTCGTTC CTCGACGTCG AATGCGAGAA GCTGTGCGAC
CTCGCGAACG ACTGGGAAAC CACCATGGTC TGGCAAGACC TGTCGCCACA AACCTGGCAG
TACATCAAGG AACGCGGCTT TCTCGGCATG ATCATTCCGA AGCAGTACGG CGGCAAACAG
TTCTCCGCCT ACGCGCATTC GCAGGTCATC ATGAAGCTCG CCACGCGCTG CTCGGCCGCC
GCCGTTTCGG TGATGGTGCC GAACTCGCTC GGCCCCGCCG AACTGCTGAT GCACTACGGC
ACCGATGAGC AGAAGAACCA CTACCTGCCG CGTCTCGCAC GCGGCGAGGA AATCCCCTGC
TTTGCGTTGA CGAGCCCGTA TGCGGGTTCC GACGCGGCGG CAATTCCCGA TGTCGGCATC
GTGTGCAAGG GCATGTTCGA AGGCCGCGAG ACGCTGGGTT TTCGCGTCAC ATGGGACAAG
CGCTACATCA CGCTCGGCCC GATCGCGACC GTGCTCGGCC TCGCGTTTCG CGCGCTCGAT
CCCGAACATC TGCTCGGCAA CGACGATGAA CCCGGCATCA CGTGCGCACT GATTCCGACC
GACCATCCGG GCGTGAACAT CGGCCGGCGT CACTGGCCGT TGAACGCGGT GTTCCAGAAC
GGCCCGAACT CAGGCAAGGA CGTGTTCATT CCGCTCGACT GGGTGATCGG CGGACGCGCC
CAGGTCGGCA ACGGCTGGCG CATGCTGATG GAATGTCTCG CGGCGGGACG GGCGATTTCG
CTGCCTTCGT CGAATGTGGG GATGGCGAAG ATCGCCGTGC GCGGCACCGG CGCCTACGCG
GCGGTTCGCC GCCAGTTCCG CACCGCCGTC GGCAAGTTCG AAGGCGTGCA GGAAGCGCTC
GGCCGCATGG GCGGCAACCT GTACGTGATG GACGCCGCGC GCCGTTTGTC CGCGCATGCG
GTGGATCTCG GCGAAAAGCC TTCGGTGATC TCCGCGATCG CCAAATATCA CATCACCGAG
CGCGCTCGCA TGGTCATCAA CGACGGCATG GATATCGCCG CCGGCAAGGG CATCTGCATG
GGGCCGTCGA ACTTTCTCGC GCGCGCCTAT CAGCAGGTGC CGATCGCGAT CACCGTGGAA
GGCGCCAACA TTCTCACGCG CTGCCTGATC ATCTTCGGCC AGGGGGCGAT TCGTTGTCAT
CCGTATGTGC TGAAGGAAAT GGCCGCCACG CGCGAGACCG ATCGCGCCAA GGCACTGCGC
GATTTCGATG AGGCGTTCTT CGGCCACGTC AGCTTCACGC TCTCCAACGT AGTGCGCAGT
TTTGTTTATG GCGTGACGGG CGGCGCGTTC ATCGCCAAAC CGCGCACGGC GCATGCGCCG
CTGCATGCTT ACTACCGCGC GGCCACCCGC CTCTCCACCG CGTTCGCGTT GCTCGCCGAT
GTCTCGATGT TCGTGCTCGG CGGCGATCTG AAACGCCGCG AGCGCATCTC CGCGCGTCTG
GGCGACGTGC TGTCGCAGCT CTACCTGATC TCCGCCACGC TCAAGCGTTT CGAAGACGAA
GGCCGTCAGG AAGAAGACCT GCCGCTGGTC CGCTGGGGCG TCGAGGACTC GCTGTACAAG
GCGCAACACG CGCTCGACGG CGTGCTCGCC AACTATCCGA ACCGCCTCGC CGCCGGCCTC
GTGCGCGTGC TCGCGTTTCC GTTCGGACTG CCGCACCGCG AGCCGTCCGA CCGCCTCGGC
AGCGAGATTG CCGAACTGAT GCAAACACCA GGCGCCGCCC GCAATCGTCT GGTGTCCGAT
TCATACGTGC CGCATCCGGA TGTCGATGCG CTCGGCTACG GTGAACTGGT GTTCGAGCTG
AACCCGCGCT TCACGCAGAT CGAGCAGAAG CTGCGCGAAG CCGTCAAGCA AGGACGGCTC
GAACCGATGC CGCAAAGCCT GCCGCAACTG GCCGCATGGA CCGACACCGC ACAGAAAAAA
GGCCTGCTCG ACGCCGACGA CCGCCGCGTG CTCGACGACT ACGCGCGTTA CGGCGCGCAA
GTCGTGAAGG TGGACGATTT CCCCGCCGAC TTCGGCATGC TCGCCAATCT GCAGAAACGC
AAGGAGGCGC TGGAAAAGGC GCTGGAGCTC GCGGCCTGA
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| Protein sequence | MPWFILVLVI AAFALVYVQA RAAWWLAFMI VWVAAAHVSG AAGPVATTLL AIVFVLPALV
LALKPLRRTW FAKPVLDIFR KILPEMSPTE RDAIEAGTVW WDAELFSGRP HWDKLLGYGP
ATLTAEEQSF LDVECEKLCD LANDWETTMV WQDLSPQTWQ YIKERGFLGM IIPKQYGGKQ
FSAYAHSQVI MKLATRCSAA AVSVMVPNSL GPAELLMHYG TDEQKNHYLP RLARGEEIPC
FALTSPYAGS DAAAIPDVGI VCKGMFEGRE TLGFRVTWDK RYITLGPIAT VLGLAFRALD
PEHLLGNDDE PGITCALIPT DHPGVNIGRR HWPLNAVFQN GPNSGKDVFI PLDWVIGGRA
QVGNGWRMLM ECLAAGRAIS LPSSNVGMAK IAVRGTGAYA AVRRQFRTAV GKFEGVQEAL
GRMGGNLYVM DAARRLSAHA VDLGEKPSVI SAIAKYHITE RARMVINDGM DIAAGKGICM
GPSNFLARAY QQVPIAITVE GANILTRCLI IFGQGAIRCH PYVLKEMAAT RETDRAKALR
DFDEAFFGHV SFTLSNVVRS FVYGVTGGAF IAKPRTAHAP LHAYYRAATR LSTAFALLAD
VSMFVLGGDL KRRERISARL GDVLSQLYLI SATLKRFEDE GRQEEDLPLV RWGVEDSLYK
AQHALDGVLA NYPNRLAAGL VRVLAFPFGL PHREPSDRLG SEIAELMQTP GAARNRLVSD
SYVPHPDVDA LGYGELVFEL NPRFTQIEQK LREAVKQGRL EPMPQSLPQL AAWTDTAQKK
GLLDADDRRV LDDYARYGAQ VVKVDDFPAD FGMLANLQKR KEALEKALEL AA
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