| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1672 |
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| Symbol | |
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| ID | 6284352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1888223 |
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| End bp | 1890028 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621233 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001895306 |
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| Protein GI | 187923664 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.455088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCACTCAAAC CACGCTTGCG CCAGGCGGCG AATCCGCCGC GCAGAACACG
GCGCCTGCTC CCACACAGGC TCACGCGCCG CACCACGCGC CCAACACCGA CGGCATCTGG
TACGCGTCGT ATCCAGCGGA CGTGCCGCAT GAAATCGACG TGTCGAAATA CGAGTCGGTC
GTGCAGTTCT TCGACGAATG CATCGCGCAG TTCCGCGAGC GTGTCGCGTA TGTGAGCGTG
GGCGCGAACC TGACCTATGG TGAACTTGGC CGCAAGGCCA CCGCGTTCGC CGCCTATCTG
CAAAGCATCG GCGTGAAGCC GGGCGAACGC GTGGCGATCA TGTTGCCCAA TACGTTCCAG
TATCCGGTCT CGCTGTTCGG CGTATTGAAG GCCGGCGGCG TGGTGGTCAA CGTGAATCCG
CTCTATACGG TGCGCGAACT CGCGCACCAG TTGAAGGACA GCGGCGCGCA AACCATCATC
GTGTTCGAGA ACTTCGCGAA GACGGTGGAA GACGCACTGC CCGGCACCAA AGTGCAGAAC
GTCATCGTGA CGGGACTCGG CGATCTGCTC GCCGACGGCC TGAATCTGAA GGGACGTCTG
CTCAATTTCA TGCTGCGGCA CGTGAAAAAG ATGGTGCCCG CCTACAACCT GCCCAAGGCG
GTGCCGCTGC TCGAAGCGCT TTCCACCGGC TACTCGCGGC CGTTGACGCC CGTGCGCCCC
ACGCACGACG ACATCGCGTT CCTGCAATAC ACGGGCGGCA CGACCGGCGT CGCGAAGGGC
GCGATGCTCA CGCACAAGAA CATCATTGCG AATTTGCTGC AGGCCAAGGC GTGGTCCGAA
GGCCAGTTGA CCGGCGAAGT CGAAACGGTG CTCACGCCGC TGCCGCTCTA TCACATCTAT
TCGTTGACGG TGAACGCGCT GATCTTCATG GGACTGGGCG GGCGCAACAT TCTGATCGCC
AATCCGCGCG ACATGAAGCG CGTGATGATG ATCATCCGTC ACGAGAAATT CACCGGCATG
ACCGCCGTGA ACACGCTCTA TAACGCGTTC CTCGACAACG AGGAATTCTG CAAGCGCGAC
TTCTCCGATC TCAAGCTCGC AATGGCGGGC GGCATGGCCA CGCAGAAGTC GGTGGCCGAA
CGTTTCAAGG CGGTGACCGG CAAGCCGATC ATCGAAGGCT ACGGGCTCAC GGAATGCTCG
CCGATCGTGT CGATGAATCC GGTCGACCTC TCCAACATGC GCGACTTCGA AGGCTCGATC
GGTCTGCCCG CGCCGTCCAC GCAAGTCCGT TTCAGGAAGG ACGACGGCAG TTGGGCGAAC
ATCGGCGAAG CGGGCGAATT GTGCGTGAAG GGACCGCAGG TGATGAAAGG CTACTGGAAT
CGTCCGGACG AAACCGCCAA GGTAATCGAC GAGGACGGCT GGCTCGCCAC CGGCGACATC
GGCGTGATGG ATTCGCGCGG CTTTATCCGG CTGATCGACC GGAAGAAGGA CATGATTCTG
GTGTCGGGCT TCAACGTCTA TCCGAACGAA GTCGAAGACG TGATCGCGGC GCATCCGGAC
GTGCGCGAAG TCGCCGCAAT CGGCGTACCC GATGCGGCGC AAGGCGAACG GGTGAAGGTG
TTTATCGTTA AGCGCAATCC TTCGCTGACG GCCGAACAGG TGATCGCGCA CTGCCGCAAG
AACCTGACCG GCTACAAGGT GCCGAAGCTC GTCGAGTTCC GCGACGAGCT GCCGCAAACC
AATGTCGGCA AGATTCTGCG CCGCGCCCTG CGCGACGAGG AACTCGCGAA GCAAAAGCCT
GCCTGA
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| Protein sequence | MTQPTQTTLA PGGESAAQNT APAPTQAHAP HHAPNTDGIW YASYPADVPH EIDVSKYESV
VQFFDECIAQ FRERVAYVSV GANLTYGELG RKATAFAAYL QSIGVKPGER VAIMLPNTFQ
YPVSLFGVLK AGGVVVNVNP LYTVRELAHQ LKDSGAQTII VFENFAKTVE DALPGTKVQN
VIVTGLGDLL ADGLNLKGRL LNFMLRHVKK MVPAYNLPKA VPLLEALSTG YSRPLTPVRP
THDDIAFLQY TGGTTGVAKG AMLTHKNIIA NLLQAKAWSE GQLTGEVETV LTPLPLYHIY
SLTVNALIFM GLGGRNILIA NPRDMKRVMM IIRHEKFTGM TAVNTLYNAF LDNEEFCKRD
FSDLKLAMAG GMATQKSVAE RFKAVTGKPI IEGYGLTECS PIVSMNPVDL SNMRDFEGSI
GLPAPSTQVR FRKDDGSWAN IGEAGELCVK GPQVMKGYWN RPDETAKVID EDGWLATGDI
GVMDSRGFIR LIDRKKDMIL VSGFNVYPNE VEDVIAAHPD VREVAAIGVP DAAQGERVKV
FIVKRNPSLT AEQVIAHCRK NLTGYKVPKL VEFRDELPQT NVGKILRRAL RDEELAKQKP
A
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