| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1653 |
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| Symbol | |
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| ID | 6282747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1868747 |
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| End bp | 1870153 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621214 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001895287 |
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| Protein GI | 187923645 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.745375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAC GGATTTGTGT TTTCAGGAAG GCGGCGTGTC TCGGCCTGGC TTTGCTGGCC
GTATCGGCGG CGACGGATGC GGCCGGTCCG GCGCAGCGGG CGCAAGCCGC GCCGGCGGCC
CAGCCGCATC AGGCCGCGTT TGCCCCGCCC GCGCAAGGCA TCGACCTGAC GGTCGGCGCG
CAGCGGCAGA TTGCTGTCGG CCACACGCTG CAGCGTGTCG CGATCGGCGA TCCGTCGGTG
GCCGACGTGC TGATCATCAA GGGCGACAAG CGCGGCGGCG TGCTGCTGGT CGGCAAGGCC
GCCGGCACCA CCAACCTGAT GCTGTGGTCA CGCGATCGTG ACGCGCCGCT GCAATACACC
GTCAACGTGA CCACGCCGGC GGCCGCCTCG CTGCTCGGGG CCGATACGCC GGCCGTCAAG
GTCCTCGGCG GCACGGCGAT CGTGTCCGGC ACGTCGGCGA CCATGGAGGC GCACCAGCGC
GCCGTGGTCG CGGCGGAGGG CTCGCTCGGC AAGGACGGTG CGGTATTCGA CACGTCGACG
GTCGCCAGCC GCGCGGTCGT GCAGGTAGAT GTGCGGGTCG TCGAGTTCAG CCGTTCGGTG
CTCAAGGAAG TGGGCTTCAA CTTCTTCAAG CAGAACAACG GCTTCACGTT CGGTTCGTTC
GCGCCGTCGG CGTTGAGCTC GGTATCGGCG ACGGCGGGAC AGGCGCCGAG CCTGACGGGT
GTGACGCCGA TCTCGTCGGC GTTCAATCTG ATCTTCAACT CCGCGACGCA CGGCCTGTTC
GCCAACCTGA GCCTGCTGGA AAGCAACAAC CTCGCGCGCG TCCTGGCCGA GCCGACGCTC
GTGGCCTTGT CCGGCCAGAG CGCCAGTTTC CTTGCCGGCG GCGAGGTGCC GATTCCGGTG
CCGCAGGCGC TCGGTTCGAC GTCGATCGAA TTCAAGCCGT ATGGCGTGGG GCTCACGCTC
ACGCCGACCG TGCTGAGCCC GCAGCGCATC GCACTGAAAG TCGCACCGGA GGCGAGCCAG
CTGGACTTTG CCAACGCGGT GACGATCAGC GGCGTGTCGG TGCCCGCGTT CACCACGCGG
CGTGCCGACA CCACCGTCGA ACTCGGCGAC GGCGAGAGTT TCGTGATCGG CGGGCTGATC
GATCGCGAGA CGGCGTCGAA TGTCTCGAAG GTGCCGTTGC TCGGCGATCT GCCGGTGATC
GGCACGTTCT TCAAGCAGTT GAACTATCAG CAGAACGAGA AGGAGCTGGT GATCATCGTG
ACGCCGCATC TGGTCTCGCC GCTCGCCAGG GGCGCGACCT TGCCGTCGAC GCCGGGCGAG
CAGTCCGAGC AGCGCAACGG GCCGGTGTGG CGTTCGCTGA TCGGCGGCGT GGCGGCACGC
GATGCGTCGC CGGGATTTTC GAAGTGA
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| Protein sequence | MTERICVFRK AACLGLALLA VSAATDAAGP AQRAQAAPAA QPHQAAFAPP AQGIDLTVGA
QRQIAVGHTL QRVAIGDPSV ADVLIIKGDK RGGVLLVGKA AGTTNLMLWS RDRDAPLQYT
VNVTTPAAAS LLGADTPAVK VLGGTAIVSG TSATMEAHQR AVVAAEGSLG KDGAVFDTST
VASRAVVQVD VRVVEFSRSV LKEVGFNFFK QNNGFTFGSF APSALSSVSA TAGQAPSLTG
VTPISSAFNL IFNSATHGLF ANLSLLESNN LARVLAEPTL VALSGQSASF LAGGEVPIPV
PQALGSTSIE FKPYGVGLTL TPTVLSPQRI ALKVAPEASQ LDFANAVTIS GVSVPAFTTR
RADTTVELGD GESFVIGGLI DRETASNVSK VPLLGDLPVI GTFFKQLNYQ QNEKELVIIV
TPHLVSPLAR GATLPSTPGE QSEQRNGPVW RSLIGGVAAR DASPGFSK
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