Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1652 |
Symbol | |
ID | 6282746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1867754 |
End bp | 1868704 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642621213 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001895286 |
Protein GI | 187923644 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.695685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.658487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAATC TGACCAAAAT TCTTGCGGGC GTTCTGATCG CGGTCGCGCT CGTGCTCGGC CTGTTCGCGT GGTCGCTGTC GCGCCGCCCG GCGCTGGTCG CGGTCACGCC CGCCACGCAA GCGAGCTTCC GGGTAGTGGT GGCGACTCAC ACGTTGCCGG CGGGCAAAGC CATCACCGTC GACGATGTGC GCGTGCAGTC GCTGCCGATC AATCCGAACG GCGCCTTCAC GGACCCCGCG CAACTGGCCG GGCGCGTGCC GAACGCGGAG ATCGGCGCGG AATCGCCGGT GCTGGAAAGC CAGTTGTCCT CGGGACTCGC CGAGCGCGTC GAACCGGGCG AGCGCGCGCT GGCTGTGCGA GTCGACGAAG GCAACGCGGT CGCCAACCGG TTGCGGCCCG GCAATTTCGT CGACGTGTTT TTCACGCTCA AGCGCGACGC CAGCATCGGC AACGGCGGCG AAATCGACCG CACCCAGGCG CGTTTGCTGA TGTCGAAAGT GCGTGTGCTC GCGTTCGGCA ATGCGACCGC GAGCGGCGAC AGCGCGGGCG ATCCGAACGG CATGGTCCGC ACCGCGGTGC TGGCGGTGCC GGTCGCCGAT ATCGACCGTC TGACGCTCGC CGAGAGCGCC GGCCGTCTGA TTTTCGCGCT GCGCAATCCC AAGGATCCCG AAGTAATCGA CCAAAGCGTG TTGCCGGCCT ATCCGGGCGT GCTGAAGACG GCGGCGCATG CGGGCGCGGC CGAGCCGCTG CGGGACTCGA CGCGCGCCGC GGTCGGCGTG GCGCTCGACT CGTTGTCGGG CACCGCCAAC GCGGGTGGCG CGAGCGCCGC CGCGCGGCCG CCGTTGCCGC ATATGCCGCT GCCGCCGACG CGCGTGGCGG GCAACACCAA CAGTACAAAG AGCGGTATCG AAGTGATACG GGGTGGGCGC GCCGAAACGG TCGCCTGGTA A
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Protein sequence | MPNLTKILAG VLIAVALVLG LFAWSLSRRP ALVAVTPATQ ASFRVVVATH TLPAGKAITV DDVRVQSLPI NPNGAFTDPA QLAGRVPNAE IGAESPVLES QLSSGLAERV EPGERALAVR VDEGNAVANR LRPGNFVDVF FTLKRDASIG NGGEIDRTQA RLLMSKVRVL AFGNATASGD SAGDPNGMVR TAVLAVPVAD IDRLTLAESA GRLIFALRNP KDPEVIDQSV LPAYPGVLKT AAHAGAAEPL RDSTRAAVGV ALDSLSGTAN AGGASAAARP PLPHMPLPPT RVAGNTNSTK SGIEVIRGGR AETVAW
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