Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1642 |
Symbol | |
ID | 6284074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1856514 |
End bp | 1857944 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621203 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001895276 |
Protein GI | 187923634 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.370947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.099089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAG AATTTGACGT CGTCGTGATC GGCGCAGGCC CTGGCGGTTA CATCGCCGCC ATCCGCGCAG CGCAGCTCGG CAAAACCGTC GCATGTATCG AAAAATGGAA GAACCCGGCC GGCGCGCTGA AGCTCGGCGG CACCTGCCTG AACGTGGGTT GCATCCCGTC GAAGGCGCTG CTCGCGTCGT CGGAAGAATT TGAAAACGCG TCGCATCACC TCGCCGACCA CGGCATTTCC GTGGAAAACG TGTCGGTCGA TATCGCGAAG ATGATGGCCC GTAAAGAAGG CATCGTCGAA AAGATGACCA AGGGCATCGA ATTCCTGTTC CGCAAGAACA AGATCACGTG GCTCAAGGGT CACGGCAAGT TCACCGGCAA GACGGACGCC GGCGTGCAGA TCGAAGTGAG CGGCGAAGGC GAAACGGAAA CGGTCACGGC GAAGAACGTG ATCATCGCCA CGGGTTCGAA GGCACGCCAT CTGCCGAATG TTCCGGTCGA CAACAAGATC GTCGCCGACA ACGAAGGCGC GCTGAGCTTC GAATCCACGC CGAAGAAACT CGCCGTGATT GGCGCAGGCG TGATCGGCCT GGAACTGGGT TCGGTGTGGC GCCGTCTGGG CGCGGACGTG ACTGTGCTCG AAGCGCTGCC GGAATTCCTC GGCGCGGCTG ACCAGGCGCT CGCGAAAGAA GCGGCTAAGC AGTTCAAGAA GCAAGGTCTG GATATCCACG TCGGCGTGAA GGTCGGCGAA GTAACCACGA CCGATAACAG CGTGACGGTC AACTACACGG ACAAGGACGG CAACGCGCAG AAGCTCGAAG CCGACCGTCT GATCGTGTCG ATCGGCCGCG TGCCGAACAC CGACAACCTC GGTCTCGAAG CGATCGGCCT GAAGGCCAAC GAGCGCGGCT TCATCGACGT CGACGATCAT TGCGCGACGG CGGTGCCGAA CGTGTACGCG ATAGGCGACG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CCGAAGACGA AGGCGTGCTG GTTGCCGAAA TCATCGACGG TCAGAAGCCG CATATCGACT ACAACTGCGT GCCGTGGGTG ATCTACACCG AACCGGAAAT CGCGTGGGTC GGCAAGACGG AACAGCAACT GAAAGCAGAA GGCCGCGAGA TCAAGACAGG CCAGTTCCCG ATGATGGCAA ACGGCCGCGC GCTCGGCATC AACAAGGCGG AAGGCTTCGT CAAGATGATC GCCGATGCGA AGACGGACGA AATCCTCGGG GTGCACATCA TCGCCGCGGA CGCATCGGAC CTGATCGCTG AAGCCGTGGT GGCGATGGAA TTCAAGGCGG CGTCGGAAGA CATCGGCCGC ATTTGCCATC CGCACCCGTC GCTGTCGGAA GTCATGCGCG AAGCGGCTCT CGCCGTCGAC AAGCGCGCGC TGAACATGTA A
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Protein sequence | MSKEFDVVVI GAGPGGYIAA IRAAQLGKTV ACIEKWKNPA GALKLGGTCL NVGCIPSKAL LASSEEFENA SHHLADHGIS VENVSVDIAK MMARKEGIVE KMTKGIEFLF RKNKITWLKG HGKFTGKTDA GVQIEVSGEG ETETVTAKNV IIATGSKARH LPNVPVDNKI VADNEGALSF ESTPKKLAVI GAGVIGLELG SVWRRLGADV TVLEALPEFL GAADQALAKE AAKQFKKQGL DIHVGVKVGE VTTTDNSVTV NYTDKDGNAQ KLEADRLIVS IGRVPNTDNL GLEAIGLKAN ERGFIDVDDH CATAVPNVYA IGDVVRGPML AHKAEDEGVL VAEIIDGQKP HIDYNCVPWV IYTEPEIAWV GKTEQQLKAE GREIKTGQFP MMANGRALGI NKAEGFVKMI ADAKTDEILG VHIIAADASD LIAEAVVAME FKAASEDIGR ICHPHPSLSE VMREAALAVD KRALNM
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