| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1639 |
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| Symbol | |
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| ID | 6284071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1849848 |
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| End bp | 1851674 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621200 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001895273 |
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| Protein GI | 187923631 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.787477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0390195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCG CCCTACGCAA CATCGCCATC ATTGCTCACG TCGACCACGG CAAGACCACG
CTCGTCGACC AGCTTCTCCG CCAGACCGCC ACGTTCCGTG ACAACCAGCA GATCGCTGAG
CGCGTGATGG ACTCGAACGA CATCGAAAAA GAGCGTGGCA TCACGATTCT TTCGAAGAAC
TGCGCAGTCG AATACGAAGG CACGCACATC AACATCGTCG ACACGCCGGG CCACGCCGAC
TTCGGCGGCG AAGTGGAGCG CGTGCTGTCG ATGGTCGATT CCGTGCTGCT GCTGGTCGAC
GCCGTCGAAG GTCCGATGCC GCAAACGCGT TTCGTGACCA AGAAGGCGCT GGCGCTCGGT
CTGAAGCCGA TCGTCGTGAT CAACAAGGTG GACCGTCCGG GCGCGCGTAT CGACTGGGTG
ATCAACCAGA CGTTCGACCT GTTCGACAAG CTGGGCGCAA CCGACGAACA ACTCGACTTC
CCGATCGTGT ACGCATCGGG TTTGAACGGC TACGCAGGCT TGACTCCGGA CGTGCGCGAA
GGCGATATGC GCCCGCTGTT CGAAGCCGTG CTGCAACACG TGCCGGTTCG CCCGGCCGAT
CCGTCGGCTC CGCTGCAACT GCAGATCACG TCGCTCGACT ACTCGTCGTA TGTCGGTCGT
ATCGGCGTGG GCCGCATCAC GCGCGGCACG ATCAAGCCGG GCATGTCCGT CGCTGTGCGT
TCGGGCCCCG ACGGCGCGAT CCTGAACCGC AAGATCAACC AGGTGCTGTC GTTCAAGGGC
TTGGAGCGCG TGCAGGTCGA CTCGGCTGAA GCCGGCGACA TCGTGCTGAT CAACGGTATT
GAAGAAATCG GCATTGGCGT GACTATCTGC GCACCGGAAC AACCGGAAGC GCTGCCCATG
ATCACCGTCG ACGAACCGAC GCTGACCATG AACTTCCTCG TCAATTCGTC GCCGCTGGCC
GGCCGCGAAG GCAAGTTCGT CACGAGCCGT CAGATCCGTG ACCGCCTGAT GAAGGAACTG
AACCACAACG TCGCACTGCG CGTGAAGGAA ACCGGCGACG AAACCACGTT CGAAGTGGCG
GGCCGCGGCG AACTGCACCT GACCATTCTC GTGGAAAACA TGCGCCGTGA AGGCTACGAG
CTGGCCGTGT CGCGTCCGCG CGTGGTGATG ACGGAAGTCG ACGGCGTGAA GCACGAGCCG
TACGAAAACC TGACCGTCGA CATGGAAGAC GGTCACCAGG GCGGCGTGAT GGAAGAGCTC
GGTCGCCGCA AGGGCGAAAT GCTCGACATG GCGTCGGACG GCCGCGGCCG TACGCGTCTT
GAGTACCGTA TTTCGGCGCG TGGCCTGATC GGCTTCCAGT CAGAATTCCT CACGCTCACG
CGCGGCACGG GCCTGATGAG CCACACGTTC GACTCGTATC AGCCGGTCAA GGAAGGCGCG
GTCGGCGAGC GTCGCAACGG CGTGCTGATT TCGCAGGACG ACGGCGCCGC TGTCGCGTAC
GCACTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTTT CGCCGGGCGA GCCGCTGTAC
GAAGGCATGA TCATCGGCAT TCACAGCCGT GACAACGACC TGGTCGTGAA CCCGATCAAG
GGCAAACAGC TGACCAACGT GCGTTCGTCG GGTACGGACG AAGCGGTGCG CCTCGTGCCG
CCGATCCAGA TGTCGCTGGA ATACGCGGTC GAATTCATCG ACGACGACGA ACTGGTCGAA
GTCACGCCGC AATCCATCCG TCTGCGCAAG CGCTACCTGA AGGAACACGA GCGTCGCAGC
GCGAGCCGCA AGGGCGCGGT GGACTAA
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| Protein sequence | MTRALRNIAI IAHVDHGKTT LVDQLLRQTA TFRDNQQIAE RVMDSNDIEK ERGITILSKN
CAVEYEGTHI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG
LKPIVVINKV DRPGARIDWV INQTFDLFDK LGATDEQLDF PIVYASGLNG YAGLTPDVRE
GDMRPLFEAV LQHVPVRPAD PSAPLQLQIT SLDYSSYVGR IGVGRITRGT IKPGMSVAVR
SGPDGAILNR KINQVLSFKG LERVQVDSAE AGDIVLINGI EEIGIGVTIC APEQPEALPM
ITVDEPTLTM NFLVNSSPLA GREGKFVTSR QIRDRLMKEL NHNVALRVKE TGDETTFEVA
GRGELHLTIL VENMRREGYE LAVSRPRVVM TEVDGVKHEP YENLTVDMED GHQGGVMEEL
GRRKGEMLDM ASDGRGRTRL EYRISARGLI GFQSEFLTLT RGTGLMSHTF DSYQPVKEGA
VGERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVSPGEPLY EGMIIGIHSR DNDLVVNPIK
GKQLTNVRSS GTDEAVRLVP PIQMSLEYAV EFIDDDELVE VTPQSIRLRK RYLKEHERRS
ASRKGAVD
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