Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1634 |
Symbol | truB |
ID | 6284568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1843440 |
End bp | 1844375 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642621195 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001895268 |
Protein GI | 187923626 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.767781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000962415 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCAC CTCAACGCCC CCGCGTGCCG CGTCGCGCGC TCGACGGCGT GCTGCTGCTC GACAAGCCGC TCGGCCTGTC GAGCAACGAC GCGCTGATTC GAGCGAAGCG TCTCTATCTG GCGAAAAAGG CGGGCCACAC CGGCACGCTC GATCCCTTGG CCACAGGCTT GCTGCCGCTC TGTTTCGGCG AAGCCACCAA GTTTTCGCAG GACCTGCTCG AAGCCAATAA GACGTATGAG GCCACCATGC GTCTCGGTGT CCGCACGACC ACCGGCGACG CCGAAGGCGA AGCGATCGAC ACGCGCGAAG TAACCTGTGA CGAGGCCGCG ATTCTGGCGG TTCTGCCGAC GTTCCTCGGC GAAATCACGC AGGTTCCGCC GATGTATTCG GCGCTCAAAC GTGACGGCAA GCCGCTGTAC GAATACGCGC GCGCGGGCCA GACGGTGGAG CGGGAAGGGC GACAGGTGAC GATCCTCGCG CTCGAAATGC TCGCCTGCGC GCTGCCGGAC GTAACCTTTC GCGTGACGTG CAGCAAGGGC ACGTATGTGC GCACGCTGGC CGAGGATATC GGCGAAGCGT TGGGCTGCGG CGCGCATCTG GTGGCGCTGC GGCGCACCGG TGTCGGCGCA CTGACGCTGG ACAATTCGGT GACGCTCGAC GCGTTGTCCG ACGCTGCCGA AAGCGAACGC GATGCATGGC TGCAACCGGT GGATGCGTTG CTGTCGACAT TCCCGCTCGT GCGCTTGAAT GAAGACGCCA CGCGCCGCTT CCTGCACGGC CAGCGGTTGA AACTGTCCGA ATTGACCATC ACGGGCGATG CAGTGAATGC ACCGCGCGTC CGGGTGTACG CGGAGCAAGG GCGTCTGCTT GGCGTCGCCA AACAAGGCGA GGGCGTGCTG GCGCCCGAGC GGCTGGTCGT CACGACGGAG AGCTGA
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Protein sequence | MTAPQRPRVP RRALDGVLLL DKPLGLSSND ALIRAKRLYL AKKAGHTGTL DPLATGLLPL CFGEATKFSQ DLLEANKTYE ATMRLGVRTT TGDAEGEAID TREVTCDEAA ILAVLPTFLG EITQVPPMYS ALKRDGKPLY EYARAGQTVE REGRQVTILA LEMLACALPD VTFRVTCSKG TYVRTLAEDI GEALGCGAHL VALRRTGVGA LTLDNSVTLD ALSDAAESER DAWLQPVDAL LSTFPLVRLN EDATRRFLHG QRLKLSELTI TGDAVNAPRV RVYAEQGRLL GVAKQGEGVL APERLVVTTE S
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