| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1631 |
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| Symbol | nusA |
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| ID | 6283218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1838235 |
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| End bp | 1839710 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621192 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001895265 |
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| Protein GI | 187923623 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00268035 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCGCG AAGTGTTGAT GCTGGTGGAT GCGCTGGCAC GCGAGAAGAA CGTCGACAAA
GACGTGGTAT TTGCCGCGCT CGAGGCGGCC CTCGCTTCGG CCTCCAAGAA ACTCTTCGAA
GAAGACGCGG ATATTCGCGT CCAGATCGAT CGTGAAAGCG GCGAACACGA AACGTTTCGA
CGCTGGAAAG TGGTGCCGGA CGAAGCCGGT TTGCAGGAGC CGGATCAGGA AATCCTGCTG
TTCGAAGCAC GCGAACAGAA GCCCGAGATT CAGCTCGACG AGTTCATCGA GGAACCGGTG
CCGTCGATCG AATTCGGCCG TATCGGCGCG CAGGCCGCCA AGCAGGTGAT CCTGCAGAAG
GTGCGCGACG CTGAACGCGA ACAGATTCTG AACGACTTCC TCGAGCGCGG CGAGCACATC
ATGACCGGCT CGGTTAAGCG TCTCGACAAG GGCAATTTCA TTGTCGAAAC CGGCCGTGTC
GAGGCGCTGC TGCGCCGCGA TCAGCTGATT CCGAAGGAAA ACCTGCGCGT GGGCGACCGC
GTGCGTGCCT ACATCGCAAA GGTCGATCGC ACCGCGCGCG GTCCGCAGAT CGAACTGTCG
CGTACGGCTC CCGAATTCCT GATGAAGCTG TTCGAGATGG AAGTGCCGGA AATCGAACAG
GGCCTGCTGG AAATCAAGGC GGCCGCGCGC GACCCGGGCG TGCGCGCGAA GATCGGCGTG
GTTGCATACG ACAAGCGCAT CGATCCGATC GGCACGTGCG TCGGTATTCG CGGTTCGCGC
GTGCAGGCGG TGCGTAACGA GCTCGGTGGC GAAAACGTCG ACATCGTGCT ATGGTCGGAG
GATCCCGCAC AGTTTGTGAT CGGCGCGCTC GCGCCGGCAG CCGTCCAGTC GATCGTCGTC
GATGAAGAAA AACATTCGAT GGACGTCGTC GTAGACGAAA ACGAACTGGC GGTCGCGATC
GGCCGCAGCG GCCAGAACGT GCGTCTTGCC AGCGAACTCA CCGGCTGGCA GATCAACATC
ATGACGCCGG ACGAATCTGC GCAAAAGCAG AATCAGGAGC GCGGCGTATT GCGTGACCTG
TTCATGGCGC GTCTCGATGT CGACGAAGAA GTCGCCGACA TCCTGATCGA CGAAGGCTTT
ACGAGCCTCG AAGAGATCGC TTATGTGCCG CTCAACGAAA TGCTCGAAAT CGAAGCATTC
GACGAAGACA CCGTTCACGA ACTGCGTAAC CGCTCGCGCG ACGCGCTGTT GACGCAGGCA
ATCGCGAATG AAGAAAAGGT CGAAAATGTA GCACTCGACC TGAAGAGCCT GGACGGCATG
GACGCCGACC TGCTCGCCAA GCTGGCCGAA CATCAGATCC AGACGCGCGA CGAACTCGCC
GAGCTGGCTG TGGATGAACT GGTCGAGATG ACCGGAATGG AAGAGGATGC CGCTAAGGCG
TTGATCATGA AAGCACGTGA ACACTGGTTC CAGTGA
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| Protein sequence | MSREVLMLVD ALAREKNVDK DVVFAALEAA LASASKKLFE EDADIRVQID RESGEHETFR
RWKVVPDEAG LQEPDQEILL FEAREQKPEI QLDEFIEEPV PSIEFGRIGA QAAKQVILQK
VRDAEREQIL NDFLERGEHI MTGSVKRLDK GNFIVETGRV EALLRRDQLI PKENLRVGDR
VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV
VAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENVDIVLWSE DPAQFVIGAL APAAVQSIVV
DEEKHSMDVV VDENELAVAI GRSGQNVRLA SELTGWQINI MTPDESAQKQ NQERGVLRDL
FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RSRDALLTQA
IANEEKVENV ALDLKSLDGM DADLLAKLAE HQIQTRDELA ELAVDELVEM TGMEEDAAKA
LIMKAREHWF Q
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