| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1550 |
|---|
| Symbol | |
|---|
| ID | 6282329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1742504 |
|---|
| End bp | 1743415 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642621114 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001895187 |
|---|
| Protein GI | 187923545 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.93213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG ACGAAATCGA CGCCTACGTC AGCGTGATTC GCTGTCAATC GCTGCAGCAG
GCAGCGCTCG CGCTCGGCCT CACGCAACCG GCGATCACCC GCCGTCTGCA GAATTTCGAA
GAGGCGCTCG GCGTCGAACT GCTCGACCGC AATACGCGTC CGCTCAAGGC GACGGCCACG
GGACGCATCG TCTACGAACA ATGCCGCGTG ATCCAGCGCG AACTCGACGT ACTGCGCGAA
ATGGTCGCCA CGGATACACC GCCGGTCGGC ACGCTGCGTC TCGGCGTCGC GCAGACCATC
GCGGATATCG CGTTGAGCGA GGCGATGCGC GGTTTGAAGA CGGACTATCC GGATCTGCAG
GCGCGCGCGT CGACCGGCTG GGGCAGCCAG TTGCTGCAAC GCGTGGAACA GGGCGAGCTC
GACGCCGCCG CGATCCTGCT GCCCAGCAAC AAGACCTTCG ACGACGCGCT CTCGGCCCGT
TCACTCGGCC GCATCAAACT GGCGGTGGTC GCGCAGAAAG GCCTGCTGAA AAAGCGCGCG
CATACGCTGG CGGAATGCCA GTCGATCGGC TGGGTGTTGA ACCCGGACGG CTGCGGTTTC
CGCGACGGCC TGCAACGCGC GCTCACCGGG CTCGGGCTCG CCCTCAAGTT GAACCTCGAA
ACGCTCGGCA CCGAATTGCA ATTGCAGCTC GTCGCGGATG GCAACGGTCT TGGCCTCGTG
CCGCTGCCTT TACTCCAGGC GAGCACCCAC GCGGACGCGC TCGATATCAT TCCGATCAGC
GACTTCAAGC CGCTCATCGA TATCTGGCTC GTGCAACCGC GCGTGCTTGG CAAACTGCAA
CAGCCGGTCG AGCGCTTCGG CGCGGCTGTC GAGCGGCAGT TCAAGGAGGC ACGCGCGCAG
CGCGCGGCCT GA
|
|---|
| Protein sequence | MKIDEIDAYV SVIRCQSLQQ AALALGLTQP AITRRLQNFE EALGVELLDR NTRPLKATAT
GRIVYEQCRV IQRELDVLRE MVATDTPPVG TLRLGVAQTI ADIALSEAMR GLKTDYPDLQ
ARASTGWGSQ LLQRVEQGEL DAAAILLPSN KTFDDALSAR SLGRIKLAVV AQKGLLKKRA
HTLAECQSIG WVLNPDGCGF RDGLQRALTG LGLALKLNLE TLGTELQLQL VADGNGLGLV
PLPLLQASTH ADALDIIPIS DFKPLIDIWL VQPRVLGKLQ QPVERFGAAV ERQFKEARAQ
RAA
|
|---|
| |