| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1543 |
|---|
| Symbol | glgC |
|---|
| ID | 6283788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1734063 |
|---|
| End bp | 1735325 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621107 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_001895180 |
|---|
| Protein GI | 187923538 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACTC CGGCACGGCT GAACGATCTG CAACGCACTA CCCTCGCCAT CGTCCTTGCG
GGCGGACGGG GCACGCGGCT CGGGCCGCTT ACCAACAAAC GCGTCAAGCC GGCGGTGCAC
TTCGGCGGCA AATACCGGAT CATCGATTTC GCCCTCTCCA ACTGTCTGAA CTCCGGCATC
CGCCGCATCG CGGTCGTCAC GCAATACAAG GCGCACTCGC TCTTGCGCCA CTTGCAGCGC
GGCTGGAGTT TCCTGCGCGG CGAGATGGGC GAATTCATCG ACTTGTGGCC CGCGCAGCAG
CGCGTGGAAG GCGCGCACTG GTATCGCGGC ACGGCGGACG CCGTCTTCCA GAACCTCGAC
ATCATCCGTT CGATCCGGCC GAAATACGTG GTGGTGCTGG CGGGCGACCA CATCTACAAG
ATGGACTACA CGCGCATGAT CGCCGACCAC GCCGAAAGCG GCGCGGATTG CACGGTCGGC
TGTATCGAGG TGCCGCGCAT GGAGGCGGTG GCCTTCGGCG TGATGCACGT CGATGCAAAC
CGCCGCGTGA CCGACTTCCT GGAAAAGCCC GCCGATCCGC CCTGCATTCC GGGCCGCCCG
GATACGGCGC TGGCCAGCAT GGGCATCTAC GTGTTCAGCG CGGATTATCT GTATTCGCTG
CTGGAAGAGA ACATCTCCAC CATCGACACC GATCACGACT TCGGCAAGGA CATCCTGCCG
CGCGTGGTCA CGCAAGGCAC GGCGATCGCG CATCCGTTCA GCATGTCGTG CGTGTCGTCG
GATCCGAACG TGGAGCCGTA CTGGCGCGAT GTCGGCACGA TCGACGCCTA CTGGGCCGCC
AATCTCGACC TCGCCTCCAC CATCCCGACG CTCGATCTCT ACGACCGCAA CTGGCCGATC
TGGACGTACC AGGAGCAGTT GCCGCCCGCC AAGTTCGTGC GCGACATGAA GGGCTTGCAA
GGCTCGGGCA ATAATCTGAT CGTGTGCGGC GGCTGCGTGA TCTCGGGCTC GCAGATTTCG
CGCTCGGTGC TCTCGTCGAA TGTGAAAGTG AGTTCGTTCT GTAACATCAA TGAGGCAGTC
TTGTTGCCGC AGGTCACCGT CGGCGCGAGC TGCCGGCTGC AGAAAGTGGT GATAGACCGC
GGCTGCGCGA TACCGGAGGG CACGGTGATC GGCGAAGATC CGGTGAGCGA CGCCGAGCGC
TTCTACCGTA CCGACGACGG CGTCGTGCTG GTCACGCCTG AAGCGCTGCG GCAGAAGGTC
TAG
|
|---|
| Protein sequence | MDTPARLNDL QRTTLAIVLA GGRGTRLGPL TNKRVKPAVH FGGKYRIIDF ALSNCLNSGI
RRIAVVTQYK AHSLLRHLQR GWSFLRGEMG EFIDLWPAQQ RVEGAHWYRG TADAVFQNLD
IIRSIRPKYV VVLAGDHIYK MDYTRMIADH AESGADCTVG CIEVPRMEAV AFGVMHVDAN
RRVTDFLEKP ADPPCIPGRP DTALASMGIY VFSADYLYSL LEENISTIDT DHDFGKDILP
RVVTQGTAIA HPFSMSCVSS DPNVEPYWRD VGTIDAYWAA NLDLASTIPT LDLYDRNWPI
WTYQEQLPPA KFVRDMKGLQ GSGNNLIVCG GCVISGSQIS RSVLSSNVKV SSFCNINEAV
LLPQVTVGAS CRLQKVVIDR GCAIPEGTVI GEDPVSDAER FYRTDDGVVL VTPEALRQKV
|
|---|
| |