Gene Bphyt_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1516 
Symbol 
ID6283795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1702008 
End bp1702379 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID642621081 
Productprotein of unknown function DUF861 cupin_3 
Protein accessionYP_001895154 
Protein GI187923512 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TCACTTTCAC CCGCATCGAC GCTAAAGGCC CTGGCGCTTC CGGTCTGAAC 
CCGGCACTGC ACGATCCGGC CGACGTCATT CTCGACGGCG CCAAGGCACC GCACGCCCTC
AACGCTTACT CCGACGCCAC CAACATGTTG TCCGCCGGCG TATGGCAATG CGATGCGGGC
ACACTGAAGC TGGCCGATCT GCCGATTCAC GAAGTGTGCG TGCTGATTGA AGGCGAAGTC
GTGATCACCA GCGACGACGG CCGCAGCGAA CGCTATGCCG CCGGCGACGC CTTCATCCTG
CACAAAGGCT TCTCGGGCAC GTGGCATATG CCGGTAGCCA CCAAGAAGTA CAGCATCGTG
TACTGCGGTT GA
 
Protein sequence
MSNITFTRID AKGPGASGLN PALHDPADVI LDGAKAPHAL NAYSDATNML SAGVWQCDAG 
TLKLADLPIH EVCVLIEGEV VITSDDGRSE RYAAGDAFIL HKGFSGTWHM PVATKKYSIV
YCG