Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1479 |
Symbol | |
ID | 6284109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1656911 |
End bp | 1657936 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621044 |
Product | porin Gram-negative type |
Protein accession | YP_001895117 |
Protein GI | 187923475 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTC GATCGTTAAG CGCGCTCGCG CTCGTTTGCG CCTCCGCATG GTGTATCGCT TCACAAGCCG TGCAGGCGCA GACGTCCGTC ACGCTGTATG GGCTCGTCGG GCTGGATATC GCCAGCAGCA AACGCAGCAA CGGACCACCC GCCGCACTCG CCGAACAGAG CCCCGGGCTA ACGGCGCCGT ACTGGGGCAT CCGCATCAAC GAAGAACTGG GTGCCGGTTA TCACGCGATC GCCGTGCTCG AGAGCTTCTT TCAGCCGACC AACGGCGGCC TTGGCCGCAC CGCCGCCGAC CCCTTCTGGG GACGCAACTC GTATGTCGGC ATCGCCGGGC CATTTGGACG CGTGACGTTC GGCCGGCACA CCAATCTGCT CTACCTTGCC GAGCAGGTCG CCAATCCGTT TCAGGCGTCG ATCCTGTTTT CGCCGCTCGT CATGCAGACT TTCACCGCGC CCTACGGCGG CGCGATTGCG GGCGACACCG TCTGGAATAA CGGCATTCAG TACACCAGCC CGAATCTGAA CGGCCTGACC GCCACGGCCG TGTATGCGCC CGGCGGCGTC GCGGGCGCGA ACGGGATCTA CAACGCCGCG TTCTCCGCGC TCTACGCCGG CGGTTCGCTC ACCGCTGTCG CGACGGTACA ACGCACGCGC GTGGTTGCGG GTGTCGCGGC GCCGACACAG AACGCGTACA TCGTCGGCGC CGCGTACGAC TTTTCGCTTT TCAAGCTGTA TGGCGCATTG CAAGGACTGC GCACCGACTC GACCGACGTC GGCGCGCACA CCTTCGAAAC CGGCCTGTCC GTGCCGCTGA CCTCACAGCT CACCGCCCTC GCCGAATGGG CGTACACGCG ACGCAGCGCG CCGAAAAACA TCGTCACAGG CCGCAATACG GGCTCCGCGG GTCTCGACTA TTTCTTGTCC AAACGCACCG ACCTCTACCT GCTCACCGTC TACGACCGGC TTTCCGGCTA TGGCACCGCG ATGACTTATG CAGCAGGAAT CCGGCATCGG TTTTGA
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Protein sequence | MNVRSLSALA LVCASAWCIA SQAVQAQTSV TLYGLVGLDI ASSKRSNGPP AALAEQSPGL TAPYWGIRIN EELGAGYHAI AVLESFFQPT NGGLGRTAAD PFWGRNSYVG IAGPFGRVTF GRHTNLLYLA EQVANPFQAS ILFSPLVMQT FTAPYGGAIA GDTVWNNGIQ YTSPNLNGLT ATAVYAPGGV AGANGIYNAA FSALYAGGSL TAVATVQRTR VVAGVAAPTQ NAYIVGAAYD FSLFKLYGAL QGLRTDSTDV GAHTFETGLS VPLTSQLTAL AEWAYTRRSA PKNIVTGRNT GSAGLDYFLS KRTDLYLLTV YDRLSGYGTA MTYAAGIRHR F
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