Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1437 |
Symbol | |
ID | 6282523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1607010 |
End bp | 1608323 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621003 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001895076 |
Protein GI | 187923434 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCG AGCAAGACGA CCACGCCGCC GGCCGGCAAC CGACACGCGC CGCAGCCGCC GCGTTTGTCG GCACCACGAT CGAGTGGTAC GACTTTTATA TCTACGCCAC GGCGTCCGCG TTGATATTCG GCAAGCTGTT CTTTCCCGGC AGCGATCCGT TTTTCGCCAC GCTGGCTTCG TTCGGCACCT TCGCGGTCGG CTTCTTCGCT CGACCGTTCG GCGGGCTGGT GTTCGGCCAC CTGGGCGACC GCATCGGCCG CAAGAAGGCG CTGGTGGCGA CGCTGGCGAT CATGGGCGTC GGCACCGTCG GCATCGGCTT CCTGCCAACT TATGCGAGCG CCGGCGTATG GGCGCCGGTG CTGCTCGTGC TGCTGCGGGT CGCGCAGGGC ATTGCGATCG GCGGCGAGTG GGGCGGCGCG GTGCTGATGG CGAGCGAACA TGCACCGCAA GGACGGCGCA CGTTCTTCGC GTCGTTCGCG CAACTCGGCA GTCCCGCGGG TCTGATCCTG TCGCTGCTCG CGTTCCGCGC GGTGGCCTCG ATGGACAAGG ACGCGTTTCT CGGCTGGGGA TGGCGCCTGC CGTTTCTCGC GAGCGCGGTG CTGCTGGTGG TCGGCCTGCT GATCCGCGCG GGCGTCGACG AATCGCCGGA ATTCAAGGCG CTCAAGGCGC AACGTCGGGT GGCCGCGCTG CCGGTCGCCG AAGTCGTGCG CGACGCGTGG CGCACGCTGT TGCTGTGCCT CGGCGCGAAC GTGATCGGCG TGGCCGGCGC ATGGTTCGTC AACACCTTCA TGCTCAATTA CACGACGCAA ACGCTCGGTC TCGATCGTTC GTTGATTCTC GATTGTCTGT TCGTGGTGGC GTTCATCCAG TTGTTCACGC AACTCGGCTC GGGATGGTTC GCGCAACGTA TCGGCACAGG GCGGTTTCTG AAGGGCGCGG CCGCGTTGGC GATGCTGTCG CCTTATCCGA TGTTCGCGCT CGTTTCGACC GGGAGGCCGG TGGCGATCGT GATCGGCATT GCGCTGGCGG TGATGTGCAT GTCGAGTTCG TACGCGGTGA TGGCCGGGTT CATGTCGACG GCGTTCCCGG TGCGCGTCAG GTATTCGGCG ATTTCGCTGT CGTATCAGGT GTGTGCCGCG CTGGCCGGCG GTCTGACGCC GCTGATCGGG ACGTTGCTCG CGCATCGTTA TCCGGGCGCA TGGTGGCCGC TGGCGGTGTT CTATAGCGTG CTGGCCGGGG TGTCGCTCGT GTGTATCGGT ACGTTGGAGC GTCGCAAGCG CGGCGCGGCG CACGGTGTGG TCGAAGCTGC GTGA
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Protein sequence | MNREQDDHAA GRQPTRAAAA AFVGTTIEWY DFYIYATASA LIFGKLFFPG SDPFFATLAS FGTFAVGFFA RPFGGLVFGH LGDRIGRKKA LVATLAIMGV GTVGIGFLPT YASAGVWAPV LLVLLRVAQG IAIGGEWGGA VLMASEHAPQ GRRTFFASFA QLGSPAGLIL SLLAFRAVAS MDKDAFLGWG WRLPFLASAV LLVVGLLIRA GVDESPEFKA LKAQRRVAAL PVAEVVRDAW RTLLLCLGAN VIGVAGAWFV NTFMLNYTTQ TLGLDRSLIL DCLFVVAFIQ LFTQLGSGWF AQRIGTGRFL KGAAALAMLS PYPMFALVST GRPVAIVIGI ALAVMCMSSS YAVMAGFMST AFPVRVRYSA ISLSYQVCAA LAGGLTPLIG TLLAHRYPGA WWPLAVFYSV LAGVSLVCIG TLERRKRGAA HGVVEAA
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