| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1413 |
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| Symbol | |
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| ID | 6283097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1578332 |
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| End bp | 1579855 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620978 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_001895052 |
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| Protein GI | 187923410 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0515679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0934254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA TCAAACAGGA AGATCTGATT CAGAGCATTG CTGATTCGCT TCAGTACATC
AGCTACTACC ATCCGCTCGA CTACATCCAG GCTCTCGGCC GCGCCTACGA GCTCGAACAG
AGCCCCGCCG CGAAAGACGC CATCGCGCAG ATTCTCACCA ACAGCCGCAT GTGCGCCGAA
GGCAAGCGCC CGATCTGCCA GGACACCGGC ATCGTCACGG TGTTCGTGAA GGTCGGCATG
GACGTGCGTT GGGACGGCGC GACGATGGGC GTCACCGACA TGATCAACGA AGGCGTGCGC
CGTGGTTATC TGAACCCGGA CAACGTGCTG CGCGCGTCGA TCGTGAGCCC GCCGGAAGGT
GGCCGCAAGA ACACGAAGGA CAACACGCCG GCCGTGATCC ACTACGAGAT CGTGCCGGGC
AATACGGTCG ACGTGCAGGT CGCGGCCAAG GGCGGCGGCT CGGAAAACAA GTCGAAGTTC
GCGATGCTGA ATCCGTCGGA TTCGATCGTC GACTGGATTC TCAAGACCGT GCCGACCATG
GGCGCGGGCT GGTGCCCGCC GGGCATGCTC GGCATCGGTA TCGGCGGCAC CGCTGAAAAA
GCGATGGTGA TGGCGAAGGA ATCGCTGATG GATCCGATCG ACATTCAGGA CGTGATCGCA
CGCGGCCCGA AGGACTGGAT CGAAGAACTG CGCGTGGAAC TGCACGAGAA GGTCAACGCG
CTCGGCATCG GCGCGCAAGG TCTGGGCGGC CTCGCCACCG TGCTCGACGT GAAGATCATG
GCCGCGCCGA CGCACGCCGC GAGCAAGCCG ATCGCGATCA TCCCGAACTG CGCGGCTACG
CGTCACGCAC ACTTCACGCT GGACGGTTCA GGCGTCGCCA AGCTCGAAGC GCCGTCGCTC
GACGCATGGC CGAAGGTGCA GTGGGAACCG GATACCGAGA AGAGCAAGCG CGTCGATCTG
AACACGCTCA CGCCGGAAGA AGTCGCCGCG TGGACGCCGG GCCAGACGCT GCTGCTGTCG
GGCAAGATGC TGACAGGCCG TGACGCGGCT CACAAGCGCA TCGCCGATAT GCTGGCCAAG
GGCGAGAAGT TGCCGGTCGA CTTCACGAAC CGCGTGATTT ACTACGTCGG CCCGGTCGAT
CCGGTGCGCG ATGAAGCCGT CGGTCCCGCG GGCCCGACCA CGGCAACGCG CATGGACAAG
TTCACCGAGA CGATGCTGTC GCAAACCGGC CTGATCTCGA TGATCGGCAA GGCGGAACGC
GGCCCGGTCG CCATCGAGGC GATCAAGAAG CACAAGGCGG CGTATCTGAT GGCCGTGGGC
GGCGCGGCGT ACCTCGTGTC GAAGGCGATT CGCAGCGCGA AGGTTCTCGC GTTCGAAGAC
CTCGGCATGG AAGCGATCTA CGAGTTCGAC GTGCAGGACA TGCCGGTGAC CGTGGCCGTC
GATTCGAACG GCACTTCCGT TCATCAAACC GGGCCGAAGG AATGGCAAGC AAAGATCGGC
AAGATTCCGG TCGCGACAGT TTGA
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| Protein sequence | MTVIKQEDLI QSIADSLQYI SYYHPLDYIQ ALGRAYELEQ SPAAKDAIAQ ILTNSRMCAE
GKRPICQDTG IVTVFVKVGM DVRWDGATMG VTDMINEGVR RGYLNPDNVL RASIVSPPEG
GRKNTKDNTP AVIHYEIVPG NTVDVQVAAK GGGSENKSKF AMLNPSDSIV DWILKTVPTM
GAGWCPPGML GIGIGGTAEK AMVMAKESLM DPIDIQDVIA RGPKDWIEEL RVELHEKVNA
LGIGAQGLGG LATVLDVKIM AAPTHAASKP IAIIPNCAAT RHAHFTLDGS GVAKLEAPSL
DAWPKVQWEP DTEKSKRVDL NTLTPEEVAA WTPGQTLLLS GKMLTGRDAA HKRIADMLAK
GEKLPVDFTN RVIYYVGPVD PVRDEAVGPA GPTTATRMDK FTETMLSQTG LISMIGKAER
GPVAIEAIKK HKAAYLMAVG GAAYLVSKAI RSAKVLAFED LGMEAIYEFD VQDMPVTVAV
DSNGTSVHQT GPKEWQAKIG KIPVATV
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