| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1385 |
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| Symbol | |
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| ID | 6281227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1553464 |
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| End bp | 1554384 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642620950 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001895024 |
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| Protein GI | 187923382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.60749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00125626 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAAAG TTGCCGTCAT TGGTGCCTCC GGGCTGCTTG GCCGCGCGCT CGTCGACGAA
CTGGCGCAGC AGAGCGATTG GCAAGTCGTC GCCACAGCAT TCAGCCGGCC GGCGCCGGGC
AAGGTCTCGC TGGATATCCG CGACGCGCGG GCGGTCGAGC AGTTCGTCGA ACGCGAAGCA
CCGGACGCGC TCGTGATTGC CGCGGCGGAG CGTCGGCCGG ACGTGTGCGA GCATGATCCC
GCGCTGGCGC GCGCGCTGAA TGTCGATGCG GTGCGCACCC TTGCCAGCGC GGCAAACCGG
CGCGGCGCAT GGACGCTGTC GATCTCTACC GACTATGTGT TCGACGGCAC GCACCCGCCC
TACCAGCACG ATTCCGTGCC CGCGCCGCTC AACGCCTATG GGCATAGCAA GCTTGAAGGC
GAGCACGCGC TGACTGAATC GACTGACCTC GGCTGCGTGT TGCGTCTGCC GCTGCTGTAC
GGGCCGATCG TCAGTTGGGC GGAGTCGGCC GTGACGAGTC TCGTGCCCGC GATCGCCGGG
TCGGCGGCGC CGGGGAGCAA GCCCGCCGTC ATGGATGCAT GGGCGATCCG TTACCCCACT
TTCACGCCGG ACGTCGCGTT CGTAATCCGC CAGATGCTCG AACGGCATGC GCAAGGCGAC
GCGATCCGCG GCATCGTGCA ATGGTCCGGC GACGAACCGA TGAACAAGTA CGAGATCGCC
GTGCGCCTTG CCGAAGCGCT GCAACTCGAC GCGCATCTGA CGCCGCAAGC TACGCCGACC
GATTCGACGC CCCGGCCGCA TAACTGCCAC CTGGCTTCGA GCCGCCTCGA GGCGCTCGGC
ATAGGCCGGC GCACGCCGTT CGATACGGCG ATTCGGCAAG TGTTAGCGGC ATTTCCGTGG
CGCGGCGCCG CACACGCATA G
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| Protein sequence | MFKVAVIGAS GLLGRALVDE LAQQSDWQVV ATAFSRPAPG KVSLDIRDAR AVEQFVEREA
PDALVIAAAE RRPDVCEHDP ALARALNVDA VRTLASAANR RGAWTLSIST DYVFDGTHPP
YQHDSVPAPL NAYGHSKLEG EHALTESTDL GCVLRLPLLY GPIVSWAESA VTSLVPAIAG
SAAPGSKPAV MDAWAIRYPT FTPDVAFVIR QMLERHAQGD AIRGIVQWSG DEPMNKYEIA
VRLAEALQLD AHLTPQATPT DSTPRPHNCH LASSRLEALG IGRRTPFDTA IRQVLAAFPW
RGAAHA
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