Gene Bphyt_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1376 
Symbol 
ID6281999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1534472 
End bp1535626 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content61% 
IMG OID642620936 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_001895015 
Protein GI187923373 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0050041 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTTAT CGATTACAAG CAACTTCGAC GCGGGTGCGA TCGAAGTGCT CTCCTGCGAA 
GAGGCGGGCA ACATCCGCTT GCGCGTGCGG CCGGACAGTC ATGCCGAGTT CGCGCAATGG
TTTTATTTCC GCTTGTCGGG CGCCGCGGGC GAACGCTGCG TGATGACTTT CGAGAATGCG
GCCGCGTGTG CCTTTGCCGA AGGCTGGCGC GACTATCAGG CAGTGGCGAG CTACGACCGC
GTGAACTGGT TTCGCGTGCC TACCTCGTAC GACGGCCGCG TGCTGACGAT CGATCACACG
CCGGATTTCG ACCGTATTTA CTACGCGTAC TTCGAGCCGT ACAGCGAGGA GCGCCACTCG
GAGTTTCTCG GCGCGGTGCA GCAGATGCCG CAGGCCACGC TCACTGAGTT GGGCACGACC
GTCGAAGGCC GGCCCGTGTC GCTCCTCACG CTCGGCACGC CGCAAACTGG CGACACGCCC
AAGAAGAAGA TCTGGCTGAT CGCGCGCCAG CATCCAGGCG AGACGATGGC CGAATGGTTT
ATCGAGGGTC TCGTGAAGCG GCTCGCGGGT TGGGGCGATT GGGCGGGCGA CCCGGTCGCG
CGCAAGCTCT ACGATCACGC GGTCTTTTAC ATCGTGCCGA ACATGAATCC GGACGGCAGC
GTGCACGGCA ATCTCCGCAC GAATGCCGCT GGCGCGAATC TGAATCGCGA ATGGATGGAG
CCGGATGCCG CGCGCAGCCC TGAAGTGCTG GCGGTGCGCG ACGCAATTCA TGCCACGGGT
TGCGATCTGT TCTTCGATAT TCACGGCGAC GAGGCGTTGC CCTATGTGTT CGTGGCCGGC
TCCGAAATGC TGCCCGGTTT CACCGAAAGG CAAGGACAGG AACAGAAAGC GTTCATTGAA
GCATTCAAGC AGGCGAGTCC TGATTTCCAG GACAAGTATG GCTACGCTGC GAGCAAGTAT
CGCGAGGACG CACTGAAGCT GGCGTCGAAG TACATCGGCA ACGAATTCGG CTGCCTGTCG
CTGACTTTGG AGATGCCGTT CAAAGACAAT GCCAATCTGC CCGACGAACG AGTGGGCTGG
AACGGCGAGC GCAGCGCGGC GCTCGGCGCT GCGATGTTGC AGGCGATCTT GCGGCACGTA
GAAACATTTG CTTGA
 
Protein sequence
MTLSITSNFD AGAIEVLSCE EAGNIRLRVR PDSHAEFAQW FYFRLSGAAG ERCVMTFENA 
AACAFAEGWR DYQAVASYDR VNWFRVPTSY DGRVLTIDHT PDFDRIYYAY FEPYSEERHS
EFLGAVQQMP QATLTELGTT VEGRPVSLLT LGTPQTGDTP KKKIWLIARQ HPGETMAEWF
IEGLVKRLAG WGDWAGDPVA RKLYDHAVFY IVPNMNPDGS VHGNLRTNAA GANLNREWME
PDAARSPEVL AVRDAIHATG CDLFFDIHGD EALPYVFVAG SEMLPGFTER QGQEQKAFIE
AFKQASPDFQ DKYGYAASKY REDALKLASK YIGNEFGCLS LTLEMPFKDN ANLPDERVGW
NGERSAALGA AMLQAILRHV ETFA