Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1373 |
Symbol | |
ID | 6281996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1531786 |
End bp | 1532958 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620933 |
Product | putative aminotransferase |
Protein accession | YP_001895012 |
Protein GI | 187923370 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00283492 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGCAC CGCACGACAC GCCTTCGAGT CCCACGTTTC CGTCTCGCCT GCCGGACGTC GGCACGACGA TTTTCACCGT GATGAGTGCG CTCGCCGCCG AAAAAGGCGC GGTGAACCTG GGTCAGGGCT TTCCCGATTT CAACTGCGAT CCGCGGATCG TCGATGCGGT CGCGAACGCC ATGCGCGACG GCCACAACCA GTACCCGCCG ATGGGCGGCG TCGCGCCGCT GCGTCAGGCG ATCTCGGACA AGATCGAGAG CCTCTACGGC CGCCGCTACA ACGCTACCAC CGAAATCACC GTGACAGCAG GCGCGACGCA AGCGTTGCTG ACCGCGATTC TCTGCACAGT CCATCCGGGC GACGAGGTGA TCGTAGTCGA GCCGACCTAC GACAGCTACT TGCCGTCCAT CGAACTGGCC GGCGGCAAGC CGGTGTTTGT CACGCTCGAT GCGCCCGATT ACGCGATCCC GTTCGACAAG CTGGCTGCCG CGATCACGCC GAAAACGCGG CTGCTGCTGA TCAACACGCC GCACAATCCG ACCGGCACGG TCTGGCGCGC GGACGACATG CGCAAGCTCG AGGAGATCGT GCGCGGCACC AACGTGCTGA TCCTGTCTGA CGAAGTGTAT GAGCACATGG TCTACGACGG CGCGCCGCAC GAGAGCGTGG CGCGCTATCC GGAACTGGCG CAGCGCAGTT TCGTGGTGTC GAGCTTCGGC AAGACGTATC ACGTAACGGG CTGGAAGGTC GGCTATGTAG CCGCGCCCGC CGCGCTCACC GCCGAGTTCC GCAAGGTGCA CCAGTTCAAT GTGTTCACGG TGAACACCCC GATGCAGATC GGCCTCGCCG ACTACATGAA AGACCCCGCT CCCTATCTCG ACCTGCCGGC GTTCTATCAG AAGAAGCGCG ACTTCTTCCG CGCTGGCCTC GCGAACTCAC GCTTCAAGCT GCTGCCGTGC ACGGGCACGT ACTTTCAGTG CGTCGACTAT TCGGCGATCA GCGACTTGCC CGAAGCCGAA TTCGCGCAAT GGCTGACTGG CGAGATCGGC GTCGCGGCCA TTCCGGTTTC GGCCTTCTAT CACGAGGCCC ACGAATCGGG CGTGGTGCGC TTCTGCTTTG CCAAGCAGGA GAGCACGCTG GCCACCGCAC TCGAGCGGCT GGCGCGCCTC TAG
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Protein sequence | MNAPHDTPSS PTFPSRLPDV GTTIFTVMSA LAAEKGAVNL GQGFPDFNCD PRIVDAVANA MRDGHNQYPP MGGVAPLRQA ISDKIESLYG RRYNATTEIT VTAGATQALL TAILCTVHPG DEVIVVEPTY DSYLPSIELA GGKPVFVTLD APDYAIPFDK LAAAITPKTR LLLINTPHNP TGTVWRADDM RKLEEIVRGT NVLILSDEVY EHMVYDGAPH ESVARYPELA QRSFVVSSFG KTYHVTGWKV GYVAAPAALT AEFRKVHQFN VFTVNTPMQI GLADYMKDPA PYLDLPAFYQ KKRDFFRAGL ANSRFKLLPC TGTYFQCVDY SAISDLPEAE FAQWLTGEIG VAAIPVSAFY HEAHESGVVR FCFAKQESTL ATALERLARL
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