Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1366 |
Symbol | |
ID | 6283729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1524459 |
End bp | 1525160 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642620926 |
Product | Glutathione S-transferase domain |
Protein accession | YP_001895005 |
Protein GI | 187923363 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.202985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00146778 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCGATG TCTATAGCTG GGCAACCCCG AACGGCCACA AGATTCACAT CATGCTCGAG GAGACGGGCC TCGCGTACAA CGTACACGGT GTGAATATCG GCACGGGCGA CCAGTTCAAC CCCGAGTTTC TCGCCATCAG CCCGAACAAC AAGATCCCGG CAATCGTCGA TTCCGAAGGC CCCAAGGGCG CGGACGGCCA GCCGTTCGCT CTCTTCGAAT CCGGCGCGAT TCTGATTTAT CTCGCCGAGA AAACCGGCAA GTTTCTGCCG ACCGATCCGG CTGCGCGCTA TTCGACGCTG CAATGGCTGA TGTTCCAGAT GGGCGGTCTG GGTCCGATGC TCGGTCAAAC GCACCACTTC CGCAACTACG CGCCGGAGCA GATTGAATAC GCGGTCAACC GTTACACGAA CGAAACGAAG CGCCTGTATG GCGTGATGGA CACGCAACTC GGCAAGACGC AATATCTCGC GGGCAACGAC TATACGATCG CGGACATCGC CGCCTTCCCG TGGACACGCT CGTGGCAAAA CCAGGGCTTG GAACTCGACG CGTTTCCGAA TGTGAAGCGC TGGCATGAAG AGATCGCCGC GCGTCCTGCG GTCGTGCGCG GTGTTGAAGT GCTGGCGTCC GCGCGTCAAC CGCTCATGGA CGACAAGGCG AAGGAAGTGC TGTTCGGTGC GACGCAATAC GCGAAGCATT GA
|
Protein sequence | MIDVYSWATP NGHKIHIMLE ETGLAYNVHG VNIGTGDQFN PEFLAISPNN KIPAIVDSEG PKGADGQPFA LFESGAILIY LAEKTGKFLP TDPAARYSTL QWLMFQMGGL GPMLGQTHHF RNYAPEQIEY AVNRYTNETK RLYGVMDTQL GKTQYLAGND YTIADIAAFP WTRSWQNQGL ELDAFPNVKR WHEEIAARPA VVRGVEVLAS ARQPLMDDKA KEVLFGATQY AKH
|
| |