| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1345 |
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| Symbol | |
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| ID | 6282441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1504123 |
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| End bp | 1504725 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642620905 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_001894984 |
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| Protein GI | 187923342 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000229518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00575892 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAGCA AACTCGAGAC CCTGAAAGCG AACCTCGAGG CGGCCTTTGG CGGCCTCCTG
CTGAACCTCA GCGAAGCAAT CGGTGAGTTG ACGATCGTCG TGAAGGCTAG CGACTACCTC
AACGTTGCAA CGCGTCTGCG CGACGACCGC TCGCTCGGCT TCGAGCAATG CGTGGATCTG
TGCGGCGTCG ACTATCAGAC TTACGCTGAA GGCGCTTACG ACGGTCCGCG TTTCGCGGCC
GTGCTGCATT TGCTGTCGGT GCAGAACAAC TGGCGTCTGC GTCTGCGCGT GTTCGCGCCG
GACGACGAAG TGCCGATCCT GCCTTCTGTC GTCGAAATCT GGAATTCGGT CAACTGGTAC
GAGCGCGAAG CATTCGACCT GTACGGCATC GTCTTCGAAG GCCATCCGGA TCTGCGCCGC
ATCCTCACCG ATTACGGTTT CATTGGTCAC CCGTTCCGCA AAGATTTCCC TGTCTCCGGT
TATGTCGAAA TGCGTTACGA CCCGGAAGAG AAGCGCGTCG TCTATCAGCC TGTGACGATC
GAGCCGCGAG AAATCACGCC GCGCGTGATC CGCGAAGATC GCTATGGCGG TCTGAAACAC
TAA
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| Protein sequence | MASKLETLKA NLEAAFGGLL LNLSEAIGEL TIVVKASDYL NVATRLRDDR SLGFEQCVDL
CGVDYQTYAE GAYDGPRFAA VLHLLSVQNN WRLRLRVFAP DDEVPILPSV VEIWNSVNWY
EREAFDLYGI VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPEE KRVVYQPVTI
EPREITPRVI REDRYGGLKH
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