| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1303 |
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| Symbol | |
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| ID | 6282967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1461259 |
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| End bp | 1462038 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642620862 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001894942 |
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| Protein GI | 187923300 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.154867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0871554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGG GAATCGCAGG ACGCACCGCG CTGGTCTGCG CGGCGAGCAA GGGCCTGGGG
CGCGGCTGCG CGGAAGCGCT CTCCGCCGAA GGCGTCAACC TGACGATCGT CGCGCGCACC
GCCGAGACGC TTGAGGCGAC CGCGGCGGAG ATCCGCAAGC AAAGCGGCGT GGAAGTGAAG
ACGGTGGCCT GCGACATCAC CACGCCGGAA GGCCGCGCGG CGGCGCTCGC CGTGTGTCCG
CAGCCGGACA TTCTGGTTAA CAACGCGGGC GGCCCGCCGC CCGGCGACTT CCGCGACTTC
ACGCATGAAG ACTGGATCCG CGCGCTCGAG AGCAACATGC TCACGCCCAT CGAACTGATA
CGCGCGACCA TCGACTCGAT GAGCGCGAAC GGTTACGGCC GCATCGTCAA TATCACAAGT
TCGGCGGTGA AGGCGCCGAT CGACGTGCTC GGCTTGTCCA ACGGCGCGCG CTCGGGGCTG
ACCGGCTTCG TCGCGGGACT TGCGCGCAAG GTCGCGCCCA CCGGCGTGAC CATCAACAAC
CTGCTGCCGG GGCTGTTCGA CACCGACCGC ATCGGCGTCA CTTTCCAGGC GCAGGCCAAG
GCGCAAAACA TTTCCGTCGA CGAGGCGCGC AAGCAGCGCA TGAAGACGAT TCCCGCCGGC
CGTTTCGGCA CGCGCGAGGA ATTCGGCGCC GCCTGCGCGT TTCTGTGCAG CGTGCATGCC
GGCTATATCA CCGGACAGAA CTGGCTGATC GACGGCGGCG CCTATCCGGG CACGTTCTGA
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| Protein sequence | MDMGIAGRTA LVCAASKGLG RGCAEALSAE GVNLTIVART AETLEATAAE IRKQSGVEVK
TVACDITTPE GRAAALAVCP QPDILVNNAG GPPPGDFRDF THEDWIRALE SNMLTPIELI
RATIDSMSAN GYGRIVNITS SAVKAPIDVL GLSNGARSGL TGFVAGLARK VAPTGVTINN
LLPGLFDTDR IGVTFQAQAK AQNISVDEAR KQRMKTIPAG RFGTREEFGA ACAFLCSVHA
GYITGQNWLI DGGAYPGTF
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