Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1261 |
Symbol | |
ID | 6282308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1417071 |
End bp | 1417619 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620820 |
Product | protein of unknown function DUF1486 |
Protein accession | YP_001894900 |
Protein GI | 187923258 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00537261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.341449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCT CTTCTCTCTC CCGGATCGCC CGCCATATGC TGGTCGCCGC AAGCTTCGCC GGCGCCTTGA GCGCCCACGC CGCAAGCGAC GCCGACCTGC CCGTGCCGCA CCACGTCGCT GTCGCGTCGA ACTCGGCGCA AAGCGCCGAA GTCGTATTGA CCGCCCGCCG CTACGCCGCC TTCTGGAACA CCGGCGACAA TGCCTACGCA AAGCTCGCAC TGTCGCCCGC CTTCATCGAC CGCACCTTGC CGGATGGACG CCCGCAAGGT CCTGACGGTC CGCTGCAGGC ATCGAAGGGT TTTCGCGCGG CGGTGCCCGA CCTGCACGCG GAAATCGACG ACCTCGTGGT AGCCGGCGAT CGCGCTTCGG TTCATCTGCA TTTCCATGGC CATTTCACCG GGCAATTTCA GGACCTCAAA GGCAGCGGCC AGACCGTCGA CTTCCAGGCC TTCGATCTGT ATCGCGTGAA AGACGGCCGC ATCGTCGAAA ACTGGCACCT CGAAGACAAC CTGACGCTGC TCAAGCAACT CGGCGCCATC AAGCCGTAG
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Protein sequence | MSTSSLSRIA RHMLVAASFA GALSAHAASD ADLPVPHHVA VASNSAQSAE VVLTARRYAA FWNTGDNAYA KLALSPAFID RTLPDGRPQG PDGPLQASKG FRAAVPDLHA EIDDLVVAGD RASVHLHFHG HFTGQFQDLK GSGQTVDFQA FDLYRVKDGR IVENWHLEDN LTLLKQLGAI KP
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