Gene Bphyt_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1261 
Symbol 
ID6282308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1417071 
End bp1417619 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID642620820 
Productprotein of unknown function DUF1486 
Protein accessionYP_001894900 
Protein GI187923258 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00537261 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.341449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT CTTCTCTCTC CCGGATCGCC CGCCATATGC TGGTCGCCGC AAGCTTCGCC 
GGCGCCTTGA GCGCCCACGC CGCAAGCGAC GCCGACCTGC CCGTGCCGCA CCACGTCGCT
GTCGCGTCGA ACTCGGCGCA AAGCGCCGAA GTCGTATTGA CCGCCCGCCG CTACGCCGCC
TTCTGGAACA CCGGCGACAA TGCCTACGCA AAGCTCGCAC TGTCGCCCGC CTTCATCGAC
CGCACCTTGC CGGATGGACG CCCGCAAGGT CCTGACGGTC CGCTGCAGGC ATCGAAGGGT
TTTCGCGCGG CGGTGCCCGA CCTGCACGCG GAAATCGACG ACCTCGTGGT AGCCGGCGAT
CGCGCTTCGG TTCATCTGCA TTTCCATGGC CATTTCACCG GGCAATTTCA GGACCTCAAA
GGCAGCGGCC AGACCGTCGA CTTCCAGGCC TTCGATCTGT ATCGCGTGAA AGACGGCCGC
ATCGTCGAAA ACTGGCACCT CGAAGACAAC CTGACGCTGC TCAAGCAACT CGGCGCCATC
AAGCCGTAG
 
Protein sequence
MSTSSLSRIA RHMLVAASFA GALSAHAASD ADLPVPHHVA VASNSAQSAE VVLTARRYAA 
FWNTGDNAYA KLALSPAFID RTLPDGRPQG PDGPLQASKG FRAAVPDLHA EIDDLVVAGD
RASVHLHFHG HFTGQFQDLK GSGQTVDFQA FDLYRVKDGR IVENWHLEDN LTLLKQLGAI
KP