Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1239 |
Symbol | |
ID | 6282664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1385408 |
End bp | 1387288 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620798 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_001894878 |
Protein GI | 187923236 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAC TCATCGAAGA CTATGCGCTC ATCGGCGACG GCCATACGGC CGCGCTAGTT TCCCGCGATG GATCGGTCGA CTGGCTCTGC TGGCCGCGCT TCGATTCGGG CGCCTGCTTC GCCGCCCTGC TCGGCACGCC CGAAAACGGC CGCTGGCTGA TCGCGCCGGT CTCGGACACG CCGCCGACCA TCACCCGGCG CTATCGCGGC GAAACGCTGA TCCTCGAAAC CGACTTCGAG ACGCCCGAGG GCGCCATCAC GCTGATCGAT TTCATGCCGC CGGGTAACGG CTGGTCGGAG ATGGTGCGGC TCGTGGTCGG CAGACGCGGC ACCGTGCGCA TGAAAATGGA ACTGGTGCTG CGCTTCGATT ACGGCTTTTC GGTGCCGTGG GTCGACCGCC TGACGCACGA CAGCGGCATC AAGGCGATCG TCGGACCGGA CACCGCCGTG TTGCGCACGC CGGTCGAATT GCGCGGCGAA GACATGAAGA CGGTCGCCGA ATTCACTGTC AGCGAAGGCG AACGGGTGCC GTTCTCGCTT GCTTACGCGG CCTCGCATCT GCGCATTCCG CCGGCGCGCG ATCCGCACAC CTCGCTGGCA CGCACCGAGA ATCACTGGCT CGAATGGTCG GCGCGCAGCA CGGTTGAAGG ACGCTGGGCC GAACCGATCC GCCGGTCGCT GATCACGCTG AAGGCGCTCG CTTACGAGCC GACCGGCGGC ATCGTCGCCG CGCCTACTAC TTCGCTGCCG GAGCAGCTCG GCGGCACGCG CAACTGGGAC TATCGCTACT GCTGGCTGCG CGACGCGACC ATCACGCTGC TCGCCATGAT GCGCGGCGGC TACTACGACG AAGCGCGCGC GTGGCGCAGC TGGCTCGGCC GCGTGATGGC CGGTGCGCCG GATCAATTGC AGATCATGTA CGGCATCGCC GGCGAGCGCC GTCTGCCTGA GTTCGAAATC GACTGGCTGC GGGGCTATCA GGACGCGAAA CCGGTGCGGA TCGGCAATAA CGCGGTCGGC CAGCGCCAGC TCGACGTCTA TGGCGAAGTG ATGAATGCGC TGCATCTGGC GCGCGTCGGC GGCCTGCAGG CGGACGACAC CGCATGGAAC GTGCAACGCG CGCTGCTGAA GCACCTCGAC ACGATCTGGC AGGAACCCGA CGAAGGCATC TGGGAAACAC GCGGCGGCCG CCAGCATTTC ACTTTCTCGA AGGTCATGGC GTGGGTCGCG TATGACCGCG CGATCAAGTC GGCGGAAATG TTCGAGCTCG AGGGCCCGCT CGACGAATGG CGCGCCACCC GCGCGCAAAT TCACGCGGAA GTCTGCGAGA AGGCCTGGAA TCCCGCGCTC AACGCGTTCT CGCAGTGCTA CGGCACCGAC CAGCTCGACG CGAGTGTGCT GCTGATGCCG TTAGTCGCCT TCCTGCCGCC GCACGATCCG CGCGTGAAAG GCACCGTGGC CGCGATCGAA CGCGACCTGA TGCACGACGG CTTCGTGATG CGCTATCGCA CGACCGAATA CGACGACGGC CTGCCGCCGG GAGAAGGGAC GTTTCTGGCG TGCTCGTTCT GGATGGTGGA CAACCTGGCG CTGCAAGGCC GCCTCGACGA AGCGATCGCG ATGTACGAAC GGCTGCTCGC GCTCTGCAAC GATGTTGGTT TGCTCGCGGA GGAGTACGAT CCCGCTGCGA AGCGTCTGGT CGGCAATTTT CCGCAGGCGT TTTCGCACGT GGCGCTCGTG CACACCGGCC TGAACCTGAT GAAACATGAA CAGGCCATGG CGCAGGCGAC CGGGCAGCCG CCCCATAACG GCACTGGAGC CACGGAACTT GATGCTGCTG CAACCCCGGA TAGCGGCGCG GCAACATCGC CAGTAGCATG A
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Protein sequence | MSALIEDYAL IGDGHTAALV SRDGSVDWLC WPRFDSGACF AALLGTPENG RWLIAPVSDT PPTITRRYRG ETLILETDFE TPEGAITLID FMPPGNGWSE MVRLVVGRRG TVRMKMELVL RFDYGFSVPW VDRLTHDSGI KAIVGPDTAV LRTPVELRGE DMKTVAEFTV SEGERVPFSL AYAASHLRIP PARDPHTSLA RTENHWLEWS ARSTVEGRWA EPIRRSLITL KALAYEPTGG IVAAPTTSLP EQLGGTRNWD YRYCWLRDAT ITLLAMMRGG YYDEARAWRS WLGRVMAGAP DQLQIMYGIA GERRLPEFEI DWLRGYQDAK PVRIGNNAVG QRQLDVYGEV MNALHLARVG GLQADDTAWN VQRALLKHLD TIWQEPDEGI WETRGGRQHF TFSKVMAWVA YDRAIKSAEM FELEGPLDEW RATRAQIHAE VCEKAWNPAL NAFSQCYGTD QLDASVLLMP LVAFLPPHDP RVKGTVAAIE RDLMHDGFVM RYRTTEYDDG LPPGEGTFLA CSFWMVDNLA LQGRLDEAIA MYERLLALCN DVGLLAEEYD PAAKRLVGNF PQAFSHVALV HTGLNLMKHE QAMAQATGQP PHNGTGATEL DAAATPDSGA ATSPVA
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