| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1238 |
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| Symbol | |
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| ID | 6282663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1383950 |
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| End bp | 1385227 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620797 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001894877 |
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| Protein GI | 187923235 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.216045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.981991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTACC AACTGCACGA ATTCCAACGG GCGATGTTGA GCCCGCTCAC CGCCTGGGCT
CAGGCCGCGT CGAAATCCTT CGCGAATCCC GCCAGCCCTT TGGCCTACGT GCCCGGCGCC
ACGCGCCTCT CAGCCGGTTA CGAACTACTC TACCGGCTTG GCAAAGATTA CGAAAAGCCT
GAGTTCAACC TCCATCAGAT CGTCAAAGAC GGCCACAACA TTCCGATCAT CGAACAGACG
ATCATCGAGA AGCCGTTTTG CCGCCTGATG CGCTTCAAGC GTTTCGCGGA CGACAGCGAC
GCTGTTACCC AATTGAAAGA CGAGCCGGTC GTGCTGGTGT GCGCACCGTT GTCAGGACAC
CACGCCACGC TGCTGCGCGA CACCGTTAAA ACACTGCTGC AGGATCACAA GGTCTACCTG
ACCGACTGGA TCGACGCGCG CATGGTGCCG CTCGAAGCCG GCCAGTTTCG TCTGGACGAC
TACGTCGCCT ACATTCAGGA ATTTATCCGT CACATTGGCG CAAAGAATCT GCACGTGATC
TCGGTATGTC AGCCGACCGT GCCGGTGCTC GCCGCCATTT CGCTGCTGGC GAGCCGCGGC
GAAGACACGC CGCGCACCAT GACGATGATG GGCGGCCCGA TCGACGCGCG CAAGAGCCCG
ACCTCGGTCA ACTCGCTCGC CACGCAGCAC TCGTACGAGT GGTTCGAGAA CAACGTGATC
TTCACGGTGC CGCCGAATTA TCCGGGCGTG GGCCGTAAGG TTTACCCGGG CTTTTTGCAG
CACACCGGTT TTGTGGCCAT GAATCCGGAG CGCCACGCGG CGTCGCATTG GGATTACTAC
CAGAGCCTGC TGCGCGGCGA CGAAGACGAC GCGGAAGCGC ACCGCCGCTT CTACGACGAG
TACAACGCCG TGCTCGACAT GGACGCGGAC TATTACCTCG ACACGATCCG CGTGGTCTTC
CAGGAATTCA GCCTTGCCGA AGGCACGTGG GACGTCTCCG GCGAACGGGT GAAACCGCAG
GACATCACGA AGACCGCGCT CTTCACGATC GAAGGCGAGT TGGACGATAT CTCCGGCGAC
GGCCAGACCT ATGCCGCACA CGATCTGTGC ACGGGCATTC CGGAAGAGCA CAAGCGTCAC
TTCACCGCGG AAAAGTGCGG GCACTACGGC ATTTTCTCGG GGCGCCGCTG GCGCACCATC
ATCTACCCGC AGCTTCGCGA CTTCATCCTC GAGCACAACA AGGCGCCGAA GGTAGCGAAG
GAAAAAGTCG AAGCCTGA
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| Protein sequence | MLYQLHEFQR AMLSPLTAWA QAASKSFANP ASPLAYVPGA TRLSAGYELL YRLGKDYEKP
EFNLHQIVKD GHNIPIIEQT IIEKPFCRLM RFKRFADDSD AVTQLKDEPV VLVCAPLSGH
HATLLRDTVK TLLQDHKVYL TDWIDARMVP LEAGQFRLDD YVAYIQEFIR HIGAKNLHVI
SVCQPTVPVL AAISLLASRG EDTPRTMTMM GGPIDARKSP TSVNSLATQH SYEWFENNVI
FTVPPNYPGV GRKVYPGFLQ HTGFVAMNPE RHAASHWDYY QSLLRGDEDD AEAHRRFYDE
YNAVLDMDAD YYLDTIRVVF QEFSLAEGTW DVSGERVKPQ DITKTALFTI EGELDDISGD
GQTYAAHDLC TGIPEEHKRH FTAEKCGHYG IFSGRRWRTI IYPQLRDFIL EHNKAPKVAK
EKVEA
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