| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1213 |
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| Symbol | |
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| ID | 6281409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1357046 |
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| End bp | 1358242 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620772 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_001894852 |
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| Protein GI | 187923210 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAA GCGACCTGAA AGCCCCCACG TGGCAATTGT CCGAACGCGC ACGCAAGCTC
ACGAGCTCGG CAATTCGCGA GATTCTGAAG GTCACGGAGC GGCCCGAAGT CATTTCGTTC
GCGGGCGGCC TGCCCTCGCC GGCCACGTTC CCGGCCGAAC GCATGCGCGC CGCGTCGGAC
CGCATTCTGC GCGACGAACC CGCCGCGGCT CTGCAATACA GCGCAACCGA AGGTTTCCTG
CCGCTGCGTG AATGGATCGC GAAGCGCTAT TCGGTGAACG GCGCGCAGAT CCGTCCGACT
CAGGTGCTGA TCACCACCGG CTCGCAACAG GCGCTCGACC TGCTCGGCAA GGTGCTGGTG
TGCCCGGACA GCCCGGTGCT GGTCGAAACG CCGACCTACC TCGGCGCGCT GCAATCGTTC
TCCATGTACG AGCCGCGTTA CGTGCAAGTG CCGACCGACG AACACGGCCT CGTCCCCGAA
GGCCTCACGC CCGAGCTGAC GGCCGGCGCC CGCCTCTTGT ACGCGCAGCC GAATTTCCAG
AATCCGACGG GCCGCCGCTT GCCGATCGAA CGCCGCCGCG CGCTCGCCGC GTTCGCGAAG
ACCGCGCCGT TCCCGGTGAT CGAAGACGAC CCGTACGGCG CGCTCGACTA CGCCGGCGAG
CCGCTGCCCA CCATGCTCTC GATGGCGCCG GACCACATCG TCCATCTCGG TTCGTTCTCG
AAGGTGCTGG CGCCGGGCCT GCGGGTCGGC TACATCATCG CGCCCGAAGA GTTGATTTTC
AAACTCGTGC AGGCCAAGCA AGCGACCGAT CTGCACACGC CGAGCTTCAC GCAGCGCATC
GTGTACGAAG TGATCAAGGA CGGCTTCCTC GACACGCACG TGCCGACTAT TCGCGAACTG
TATCGCGATC AATGCGCGGC CATGCTGGCT TCGCTCGAAC GCTACATGCC CGAAGGCGTA
AGCTGGAATC GCCCGGAAGG CGGCATGTTC GTGTGGGTGA ATCTGCCCGC GCAGATCGAC
AGCATGAAGC TGCTGGAAGA AGCGGTTGCG CAGAACGTCG CGTTCGTGCC GGGCGGTCCG
TTCTTCGCGA ACGAAGCGCA ACACAACACG CTGCGGCTGT CGTTCGTGAC GGTGCCGCCG
GCCAGGATCG ACGAAGGCGT GTCGCGTCTC GGCGCGCTGA TCCGCGCGAA GATCTGA
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| Protein sequence | MDQSDLKAPT WQLSERARKL TSSAIREILK VTERPEVISF AGGLPSPATF PAERMRAASD
RILRDEPAAA LQYSATEGFL PLREWIAKRY SVNGAQIRPT QVLITTGSQQ ALDLLGKVLV
CPDSPVLVET PTYLGALQSF SMYEPRYVQV PTDEHGLVPE GLTPELTAGA RLLYAQPNFQ
NPTGRRLPIE RRRALAAFAK TAPFPVIEDD PYGALDYAGE PLPTMLSMAP DHIVHLGSFS
KVLAPGLRVG YIIAPEELIF KLVQAKQATD LHTPSFTQRI VYEVIKDGFL DTHVPTIREL
YRDQCAAMLA SLERYMPEGV SWNRPEGGMF VWVNLPAQID SMKLLEEAVA QNVAFVPGGP
FFANEAQHNT LRLSFVTVPP ARIDEGVSRL GALIRAKI
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