Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1083 |
Symbol | |
ID | 6281144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1222981 |
End bp | 1223898 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620644 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001894725 |
Protein GI | 187923083 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGAC TGACGAGCCT TGGCGTATTC GTCGCGGCTG TCGAGGAAGG CAGTTTTGCT GCTGCGGCGC GCCGCTTCGG GCTATCGGCA GCGATGGCCG GCAAGCATGT AAGCGCAATC GAGGCTGAGC TGAATGCGCG ACTGCTCCAG CGCACTACGC GACGGTTAAG TCTGACCGAC GCCGGCCAGA CCTACTATGA GCGCTGTAAG CGGATCCTTG AAGCGTTCGA CGAAGCGAAT CGGGAAGCGG GTGATTCGCA AGGCACGGCG CACGGCGTAC TGCGCGTCGC AGCGCCGGTC ACGTTCGGCG CCATGCACCT GGGCGAGGTT GTTGCCCGCT ACCTGGAGGA CCATCCGCAC GTCAACGTGG AAGTGCTGCT CGGGGACCGC TATGTCGATC TCATGGATGC GGGCGTTGAC GTGGCAATTC GGATAGGACG GCTGACGGAC CCACGACTGG TGATGCGCCG GCTTGCGCCC TGCCGAATGG TCGTATGTGC GTCTCCCGCG TACCTCGAGC GCCATGGCGC GCCGCGCAAA CCCGAAGACT TACGACTCGC GCAGCGGCTT ACCTTCAGCG AAGCCGTGTC GGCCGGCGAC TGGACATTGC TCGATGCGAG AAACCGCGCG CACGTGATCG ACGGACCATG CCGGCTGACA GCCAACAATA CGCAGATGCT TCTTGCCGCC GCGCTCGCGG GCGCCGGTAT CGCGTACGGT CCGACCTTCG TGTTCGGCGA GCATCTACGG CGGGGCGAAC TGGTGGCACT GCTACCGGCT TACCGCGCGG CTGATCTGGC GATTCAAGCG GTTTATCCGA GCGCGCAGCG CATACCGCTC AAAGTGCGCC GGTTCGTCGA TTACCTTGCC GAGACTTTTG GCGATTTACC GCCTTGGGAT CGGAACGCAA GGCTATAA
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Protein sequence | MDRLTSLGVF VAAVEEGSFA AAARRFGLSA AMAGKHVSAI EAELNARLLQ RTTRRLSLTD AGQTYYERCK RILEAFDEAN REAGDSQGTA HGVLRVAAPV TFGAMHLGEV VARYLEDHPH VNVEVLLGDR YVDLMDAGVD VAIRIGRLTD PRLVMRRLAP CRMVVCASPA YLERHGAPRK PEDLRLAQRL TFSEAVSAGD WTLLDARNRA HVIDGPCRLT ANNTQMLLAA ALAGAGIAYG PTFVFGEHLR RGELVALLPA YRAADLAIQA VYPSAQRIPL KVRRFVDYLA ETFGDLPPWD RNARL
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