| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1068 |
|---|
| Symbol | |
|---|
| ID | 6281970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1202929 |
|---|
| End bp | 1206156 |
|---|
| Gene Length | 3228 bp |
|---|
| Protein Length | 1075 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642620630 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_001894711 |
|---|
| Protein GI | 187923069 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTCTT CCGGATCGGC GCGCCCTGCC CGCCGCAACA CTGCATTGCC CAACGCTCGC
GCGGCCGACG CCGCCCAGCC GGCCGCTTCT GCCATCGCTT CTGCCGCCGC CTCGGCCACA
ACCGCTGCCG AGTCCACATC GGCCAAACGC GCCGGCAAAC CCGCTCAGGC CGCTCACGCC
GCCAAAGCCG GCAAGGCCGC CAAAACCTCC ACGCCCGTCA AGACGGACAA GGCCGTGAAG
GCAGTCAAGA CGGGTAAGAC GACGCAAGCC GCAGCCACCG TCAAGGCGCA GAAACCGGCC
AAGGCCGCTT CCGCGAAGAT CAAGGTCGTT GCCAACGCGC CGCAAGCGCC CGCGCTGCAG
GCCGTGGCGG AGCAATCACC AGCGTCCGCA AACACATCGG CGCCGAAGGG CAATGGCCGC
ACGCGCGAGG ACAAGGACCA TCCGCTGTTC CAGGACATCC GCTATCTCGG GCGCCTGCTC
GGCGACGTGC TGCGCGAACA GGAAGGCGAC GCGGTGTTCG ACGTCGTCGA AACGATCCGC
CAGAACGCCG TGCGCTTTCG CCGCGAAGAC GACAGCGCCG CCGCGCAAAC GCTCGACAAG
AAACTGCGCT CGCTGAGCCC GGAGCAAACG GTCAGCGTGG TGCGCGCGTT CAGCTACTTC
TCGCACCTCG CGAACATTGC CGAAGACCGC CACCGCAACC GCCGTCACCG CATTCACGCA
CTGGCCGGTT CGACCTCGCA GCCGGGCACG ATTGCCCATG CGCTCGAACG GCTGGTCGAA
GCCAACGCGG CCGCCACGCC GGTCCTGCAG CAGTTCTTCA ACGACGCGCT GATCGTGCCG
GTGCTCACCG CGCACCCGAC CGAAGTGCAA CGCAAGAGCA TTCTCGACGC GCAACACGAC
GTCGCGCGTC TGCTCGCCGA ACGCGATCAG CAGTTGACCG AGCGCGAGCG CGCGCACAAC
GAAGCGATGC TGCGCGCCCG CGTCACGTCG CTATGGCAAA CGCGCATGTT GCGCGATTCG
CGCCTCTCCG TGGCCGACGA AATCGAGAAC GCGCTGTCGT ACTACCGCGC CACTTTCCTC
ACCGAAATTC CGGCGCTCTA CGCCGATATC GAAGAAGCGC TCACCGAGCA CGGCATCGAC
GCGCGCCTGC CGCCGTTCTT CCAGATGGGC AGCTGGATCG GCGGCGACCG CGACGGCAAT
CCGAACGTCA CGGCCGAGAC GCTCGAAAAC GCGATCACCC GCCAGGCCGC GGTGATCTTC
GAGCACTACA TGGAACAGGT GCACAAGCTC GGCGCGGAGT TGTCGGTGTC GAACCTGCTG
GCCGGCGCCA GCGAAGCCCT GAAGGAACTC GCCGCGATCT CGCCCGACCA GTCGCCGCAC
CGCACCGACG AACCGTATCG CCGCGCGTTG ATCGGCATGT ACACGCGGCT CGCCGCGAGC
GCGCGCGTGC GCCTCGGCGA AGGCAGCGTG CCGGTGCGCA GCGCGGGCCG CGGCGTGGCG
CCGATCCGCG CCAAGCCGTA CGACGACTCG TCCGAATTCG TGCGCGACCT GCACGTGCTG
ATCGATTCGC TCGCCGAGCA TCATGGCGCG CCGCTCGCCG CGCCGCGTCT GTCGCCGCTC
GCGCGCGCCG CCGAAGTGTT CGGCTTCCAT CTGGCGAGCA TCGACTTGCG CCAGAGCTCC
GACATTCACG AAGCGGTAAT CGCCGAACTG CTCAAGCGCG CCGGCGTCGA GGACGACTAC
GCGGCACTCA CCGAAGAAGA CAAGCTCAAG GTGCTGCTTG CCGAACTGGC GCAGCCGCGT
TCGCTACGCC TGCCATACGC GGAATACTCC GATCTCGTGA AGAGCGAGCT CGGCGTGCTC
GAGGAAGCCC GCATCACGCG TGAGAAATTC GGCGCGCGCG CGGTGCGCAA CTACATCATT
TCGCACACGG AGACCGTGAG CGATCTGGTC GAAGTAATGT TGCTGCAAAA GGAAACCGGC
CTGCTGCGCG GACGCCTGGG CGATGCGAAC GATCCGGCGC AAGCGGGCCT GATGGTGATC
CCGCTGTTCG AGACGATCCC CGACTTGCGC AACGCGCCGC ACATCATGCG CGATCTGATC
GCGCTGCCGG GCGTCGACGC GCTGATCGAA CATCAGGGCA ACGAGCAGGA AGTCATGCTC
GGCTATTCGG ACAGCAACAA GGACGGCGGC TTCCTCACGT CGAACTGGGA GTTGTACCGC
GCCGAACTCG CGCTGGTGTC GCTTTTCAAC GAACGCGGCG TGACGCTGCG CCTGTTCCAT
GGACGCGGAG GCACCGTCGG CCGCGGCGGC GGTCCGACCT ATCAGGCGAT TCTGTCGCAG
CCGCCCGGCA CCGTCGACGG CCAGATCCGC TTGACCGAGC AAGGCGAAGT GATCGCGAGC
AAGTTCGGCA ATCCGGAGAT CGGCCGGCGC AATCTGGAAA CGGTGGTCGC CGCCACGCTC
GAAGCATCCT TGCTGCCGCA CGACATTGCG CCGGCGCAAT TGCCCGCGTT CGAAGAAACC
ATGCAGCAGT TGTCGGACGC GGCGATGGCG TCGTACCGCG CGCTGGTCTA CGAAACGCCG
GGCTTCAAGG AGTATTTCTT CGAGTCGACG CCGATCGCGG AGATCGCCGA GTTGAACATC
GGCAGCCGTC CGGCCTCGCG CAAATTGCAG GATCCGAAGC AACGCAAGAT CGAAGATCTG
CGCGCGATTC CGTGGGGCTT CTCATGGGGC CAATGCCGTT TGCTGCTGAC CGGCTGGTAC
GGTTTCGGCA GCGCGGTGGC CACGTACCTG GACAGCGCGC CGACCGACGC CGAACGCAAG
AGCCGTCTCG CGTTGCTGAA AAAAATGCAC AAGACCTGGC CGTTCTTCGC GAACCTGCTG
TCGAACATGG ACATGGTGCT GGCAAAGACC GACCTCGCGG TCGCGTCGCG CTACGCCGCG
CTCGTGTCCG ACAAGAAGCT GCGCAAGCAC GTGTTCGAGC GGATCGTCGC GGAGTGGGAG
CGCACGTCGA AGGTGTTGTC GGAGATCACG GGCAAGAGCG AACGGCTCGC GGAGAACCCG
CTGCTCGCGC GTTCGATCAA GAACCGCTTC CCGTATCTCG ATCCGCTGAA TCACTTGCAG
GTGGAGTTGC TCAAGCGTCA CCGCGCGGGC GACACGAACG CGCGCGTGCG GCGCGGGATT
CATTTGAGCA TCAACGGGAT TGCGGCGGGC TTGCGCAATA CGGGTTAA
|
|---|
| Protein sequence | MTSSGSARPA RRNTALPNAR AADAAQPAAS AIASAAASAT TAAESTSAKR AGKPAQAAHA
AKAGKAAKTS TPVKTDKAVK AVKTGKTTQA AATVKAQKPA KAASAKIKVV ANAPQAPALQ
AVAEQSPASA NTSAPKGNGR TREDKDHPLF QDIRYLGRLL GDVLREQEGD AVFDVVETIR
QNAVRFRRED DSAAAQTLDK KLRSLSPEQT VSVVRAFSYF SHLANIAEDR HRNRRHRIHA
LAGSTSQPGT IAHALERLVE ANAAATPVLQ QFFNDALIVP VLTAHPTEVQ RKSILDAQHD
VARLLAERDQ QLTERERAHN EAMLRARVTS LWQTRMLRDS RLSVADEIEN ALSYYRATFL
TEIPALYADI EEALTEHGID ARLPPFFQMG SWIGGDRDGN PNVTAETLEN AITRQAAVIF
EHYMEQVHKL GAELSVSNLL AGASEALKEL AAISPDQSPH RTDEPYRRAL IGMYTRLAAS
ARVRLGEGSV PVRSAGRGVA PIRAKPYDDS SEFVRDLHVL IDSLAEHHGA PLAAPRLSPL
ARAAEVFGFH LASIDLRQSS DIHEAVIAEL LKRAGVEDDY AALTEEDKLK VLLAELAQPR
SLRLPYAEYS DLVKSELGVL EEARITREKF GARAVRNYII SHTETVSDLV EVMLLQKETG
LLRGRLGDAN DPAQAGLMVI PLFETIPDLR NAPHIMRDLI ALPGVDALIE HQGNEQEVML
GYSDSNKDGG FLTSNWELYR AELALVSLFN ERGVTLRLFH GRGGTVGRGG GPTYQAILSQ
PPGTVDGQIR LTEQGEVIAS KFGNPEIGRR NLETVVAATL EASLLPHDIA PAQLPAFEET
MQQLSDAAMA SYRALVYETP GFKEYFFEST PIAEIAELNI GSRPASRKLQ DPKQRKIEDL
RAIPWGFSWG QCRLLLTGWY GFGSAVATYL DSAPTDAERK SRLALLKKMH KTWPFFANLL
SNMDMVLAKT DLAVASRYAA LVSDKKLRKH VFERIVAEWE RTSKVLSEIT GKSERLAENP
LLARSIKNRF PYLDPLNHLQ VELLKRHRAG DTNARVRRGI HLSINGIAAG LRNTG
|
|---|
| |