| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1042 |
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| Symbol | |
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| ID | 6282806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1175099 |
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| End bp | 1176415 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642620603 |
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| Product | hydroxymethylpyrimidine transporter CytX |
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| Protein accession | YP_001894685 |
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| Protein GI | 187923043 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family
[TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.144538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.528331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG ATCCACTCGC CGGCGATGCC GGTTCCACCT ACGCACCGCT CACGCCGGTG
CCCGACGCGC GTCGCGCGTT CCGCACCGGC GACGCGTTCG CGCTCTGGTT CTCGCTCGGC
ATCGGCCTGC TGGTTGCGCA AGCGGGCGCG CTGCTAGTGC CGGGATTGTC GCTGCCGCAT
GCGCTGCTGG CCATCGCGAT CGGCAGCGTG ATCGGCGTCG TGCTGCTGGC GCTGGCCGGC
GTGATCGGCA CGGATACGGG GCTCGCGGCC ATGTCGTCAC TGCGGCCGAC GCTCGGCGTG
CGCGGCGCGT CGGTGCCCGC CGTGCTGAAC GCGGTGCAAC TGGTCGGCTG GGGCTCGTTC
GAGGTGATCG TAATGCGCGA TTCCGCCGAC GCCCTCGCCA AGCAGGCCTT CGGCCTCTCC
ATGCCGCTCA TCTGGACGGT GATCTTCGGC TTACTCGCGA CGCTGCTCGC GATCAGCGGC
CCGCTCTCGT TCGTGCGGCG CTTTCTGCGT ACGTGGGGCA TCTGGCTGCT GCTCGCGGGC
GCGGCGTGGC TCACCTGGAA TCTGCTCGCC AAGCACGATC TGAACGCGTT GATGCAGCGT
CCGGGCACGG GCGAGATGTC GTTTGGCGGC GCGATCGATC TGGTAGTGGC CATGCCGCTG
TCGTGGCTGC CGCTGATCGC CGACTACACG CGTTTCGGCC GCAAGCCCGG CGAAACCTTC
CGCGGCACGC TGATCGGTTA CGGCATCGCC AACATCTGGT TTTACGCACT CGGCGCGGTC
TACGGCCTCG CGGCGGGCGG CGGCGACGCG CTGTTGACCG GCGCATTGGC GCAAGCCGGC
GGCGGCCTCG CGCTGCTGCT GATCCTGATC GATGAAGTCG ACAACGCCTT CGCGGACATC
CACTCGGCCG CGGTGTCGAC CGGCACGTTC TGGACGCGCG GCAGCGTGCC CATTTTGTCG
GCGGCGTTCG GCGCGCTGTG CACGCTGATC GCCCTTGCCG TGCCGATGGC AAAGTATCAG
AACTTCCTGC TGCTGATCGG CTCGGTATTC GCGCCGCTGT TCGGCGTGGT GCTGGTGGAT
CACTTCATCG TGCGCAAGCG TCGTATCGAA GCCGCCGCGC TCGCCGACGT GCGCGGCCGT
TATGGCTTCT CAGGCGGCTG GCATCTGAGC GCGTTCCTTG CGTGGGCGAT TGGTATCGTC
GCGTATCAGG TGATCAATCA ATGGCTGCCG AATCTCGGCG CGACCTTGCC CGCGTTGGTG
ATCGGCGCGG TGTGTTATCT GGTGTTCGTG ACGGCGCGCA AGACCGCGTA TGCCTGA
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| Protein sequence | MAQDPLAGDA GSTYAPLTPV PDARRAFRTG DAFALWFSLG IGLLVAQAGA LLVPGLSLPH
ALLAIAIGSV IGVVLLALAG VIGTDTGLAA MSSLRPTLGV RGASVPAVLN AVQLVGWGSF
EVIVMRDSAD ALAKQAFGLS MPLIWTVIFG LLATLLAISG PLSFVRRFLR TWGIWLLLAG
AAWLTWNLLA KHDLNALMQR PGTGEMSFGG AIDLVVAMPL SWLPLIADYT RFGRKPGETF
RGTLIGYGIA NIWFYALGAV YGLAAGGGDA LLTGALAQAG GGLALLLILI DEVDNAFADI
HSAAVSTGTF WTRGSVPILS AAFGALCTLI ALAVPMAKYQ NFLLLIGSVF APLFGVVLVD
HFIVRKRRIE AAALADVRGR YGFSGGWHLS AFLAWAIGIV AYQVINQWLP NLGATLPALV
IGAVCYLVFV TARKTAYA
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