Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1034 |
Symbol | |
ID | 6283498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1164949 |
End bp | 1166457 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620595 |
Product | flagellar hook-associated 2 domain protein |
Protein accession | YP_001894677 |
Protein GI | 187923035 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.460836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCA TCACTTCCTC GGTGAATAGC GCGACGGCCA ACGCGCAAAG CCAGGTGCAG CAAGCGGCGC AATCCATTAT CAGCGGTTCG ACCGGCAATT CGTCGATGGA TGTGGCGAGC TTGGTCTCGG TGCTCGTCAA CGCCAAAACG GCGGGTCAGG CGGCGTCGTT GCAGGCCCGG CAGACTAGCG ACAACACGAC ATTGTCCGCG TACGGCGCGC TCACTTCGGC GTTGTCCGCC TTGCAGGCGG CGATTAAAAA TCTGTCGGAC GGCACCACCT TGTCCACCTT CGCGGCCACC GCGAGCGGCA AGGGCCTCGA CCCGAAAGCG GGCCCCGGCG CGGTGGCCGG CAGCTATGCG ATCGACGTGA CGCAGATCGC CTCGTCGCAG AGCCTGGCGT CGGCGGCGTT CGGCGCGACG ACGAAACTCG GCACCGGCAC GTTGACGATC TCGGTCGGCG GCAAGCCGAT GGACGTCTCC ATCGACAGCA CCAACAACAC GTTGAGCGGC ATCGCCAGCG CGATCAACAA GGCGTCCAAC AATCCGGGCG TGACTGCGAC GATCGTGACC GGCACCGGCG GCGCTCACCT CGTGCTGCGC TCGGCCACCA CCGGCTCGGG CAACACGATC AACGTGGCCA CCAGCAACGT ACAGAACGAC GCGGGCCTGT CGAGCCTCGG CGTGACTTCG ACACCCGGCG CGAACGGCGG AGCGTCCACG ATCGTGTCGT CGGATGCCGG CAATGCGTGG CGTCAGAGCG AAGTGGCGCA GGACGCGTTG GTGACCATCG GCGGGATCGC GGCGCGCAGT GCCAACAATG CCGTGACCGA TGCGATTGAC GGCGTCACGC TGAATCTGTC GGCCGCGTCG GTCGGCAGTC CGCAAACGCT GACGATCGCG CCCGACACCA CCGCGCAGAA CACGGCCATC ACAAACTTCG CCAACCTGTA CAACACGGTG GTCACCACGA TCGGCAAGTT GTCCTCGTAC GACAAATCGT CGAAGACGGG CGGTGCACTG CTTGGAGACT CGACGCTGCT GACGGTGAAG AATGCGTTGG CGTCGATCAT CGCCGGCGGC GTGGGTAAGG GCACTTCCGT AGTGAGCCTC GGGCACATCG GCATCACGCT GAAGGGCGAT CCCGCGGACG GCACGCTGGT CGTCGACAAC GCCAAACTGA CGACAGCGCT CAATAGCAGC CCAGCGCAAG TTTCCGCGCT GTTCAACTCG ACCGACGGCG TCGGCGCCAA ACTGAACAAG AGCATCGACG AGTTCACGCG GACGGGCGGC ATCATCGACA CGCGCAACAA CGCGCTCAAC GCCGACCTGA AAAGCGTCAC CGCGCAGCAG ACCAAGCTGA GCGACTACGC CACGCAATTG ACGAAGCAGT ATCAGAGCCA ATTCACCGCG CTGAACACGT TGATGGCGAC CATGAACAAC AACTCGGCCT ATCTGACGGC GCTATTCGGC GGCTCAAAGA GCGCGGGCGC GCTGGCGACC AACAAGTAG
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Protein sequence | MSSITSSVNS ATANAQSQVQ QAAQSIISGS TGNSSMDVAS LVSVLVNAKT AGQAASLQAR QTSDNTTLSA YGALTSALSA LQAAIKNLSD GTTLSTFAAT ASGKGLDPKA GPGAVAGSYA IDVTQIASSQ SLASAAFGAT TKLGTGTLTI SVGGKPMDVS IDSTNNTLSG IASAINKASN NPGVTATIVT GTGGAHLVLR SATTGSGNTI NVATSNVQND AGLSSLGVTS TPGANGGAST IVSSDAGNAW RQSEVAQDAL VTIGGIAARS ANNAVTDAID GVTLNLSAAS VGSPQTLTIA PDTTAQNTAI TNFANLYNTV VTTIGKLSSY DKSSKTGGAL LGDSTLLTVK NALASIIAGG VGKGTSVVSL GHIGITLKGD PADGTLVVDN AKLTTALNSS PAQVSALFNS TDGVGAKLNK SIDEFTRTGG IIDTRNNALN ADLKSVTAQQ TKLSDYATQL TKQYQSQFTA LNTLMATMNN NSAYLTALFG GSKSAGALAT NK
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