| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1029 |
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| Symbol | |
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| ID | 6284131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1159872 |
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| End bp | 1160810 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620590 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001894672 |
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| Protein GI | 187923030 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0213749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0773532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCTT CTATCAGCGG AAACGGGAAA ACGGCCACCG TGACCCGCCG CGCGTCGCCG
ATGGCGGCCC TTGCCGATCG CTGGATTCCG AAGCTGGTGC TCGCACCCAG CGTCGTGATC
AGCCTGATCT TCGTGTATGG CTTTATCGCC ATTACCGGCT ATCTGTCGCT GTCCAATTCG
CGACTGATGC CACGTTATGA ATTTGTCGGT CTGGATCGTT ATCGCGAACT GTTCGATAAC
GATGTGTTCT GGACGTCGGC TGCCAACCTT GGCTGGTTCG GCATCCCGTT CATTGGTGTC
TGTATCGGTC TCGGTTTGTT CCTCGCGATC CTGCTCGATC AGCAGATCCG CAACGAAGGC
GCGCTGCGCG CCGTGTTCCT GTACCCGATG GCGCTCTCGT TCATCGTGAC GGGTACGGCG
TGGCAATGGA TCATGACGCC GAGCATCGGC CTCGAAAAGG TGTTCCACGA CTGGGGCTGG
ACGAGCTTCT CGTTCAGTTG GCTGGGCGAC CCGGACAAGG CGATTTTCTG CGTGGTGATC
GCGGCTGTCT GGCAATCCAC CGGCTTCGTG ATGGCGCTGT TCCTCGCGGG CTTGCGCGGC
GTGGACGGTG AAATCTTCAA GGCCGCGCAG ATGGACGGCG CGGGCTTGCC CACCATCTAT
CGCAAGATCG TGATTCCGAG CATGCGCCCG GTGTTCTTCT CCGTGCTGCT GATTCTCTGC
CACATCACGA TCAAGACCTT CGACCTGGTG GTTGCGTTGA CCGCGGGTGG TCCGGGCACG
TCTTCGTCGC TGCCGGCTAT TTTCATGTAC ACGTTTTCGT TCAATCGCGG GCAGCTGGGC
GTCGGCGCGG CATCGTCGAT GATGATGCTC GCCACCGTCG TGGCCGTGCT CGTGCCGCTG
ATGTATCTGG AATCGAGGAG CACCCGCAAT GCAGCCTAA
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| Protein sequence | MTASISGNGK TATVTRRASP MAALADRWIP KLVLAPSVVI SLIFVYGFIA ITGYLSLSNS
RLMPRYEFVG LDRYRELFDN DVFWTSAANL GWFGIPFIGV CIGLGLFLAI LLDQQIRNEG
ALRAVFLYPM ALSFIVTGTA WQWIMTPSIG LEKVFHDWGW TSFSFSWLGD PDKAIFCVVI
AAVWQSTGFV MALFLAGLRG VDGEIFKAAQ MDGAGLPTIY RKIVIPSMRP VFFSVLLILC
HITIKTFDLV VALTAGGPGT SSSLPAIFMY TFSFNRGQLG VGAASSMMML ATVVAVLVPL
MYLESRSTRN AA
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