| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0945 |
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| Symbol | |
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| ID | 6284165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1063946 |
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| End bp | 1064482 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620505 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001894588 |
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| Protein GI | 187922946 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA AACGTCATGA ACCGGACCGA ACGGCGCCTG CGCCGCGCCA GGCCGATGCA
CAGCTGCTGC CCACCTTATT CGATCGGCTG CGCGACGACG CACCGCACCG GCAGACCGAG
TCGCCCGGCG ACTATGCGGT CAGCCGGGCG CAGATGCGCG ACATCATCCA GCGCGATCTT
GCGTTTCTGC TCAACGCGAC CAGCATGGAA GACCTGATCG ATCGGAAGCG GCATTCATAC
GCGGCCGCAT CGACCATCAA CTTTGGCGTG CCGCCGCTCG CAGGGGCGTT CATGGCGTCG
CACAAATGGG CAAAGATCGA GGAGGTGATA CGGGGCGCCA TACGCGACTT CGAGCCGCGG
CTGATTGCAC ATACGGTGCA GGTCGTGCCC CTCACGGATG TCGATAGCCA GAGTCGCTAC
AACCACCTCG CGTTCGAGAT CCGCGGAATG ATCCACATGG ACCCCTATCC GCTCGAGTTC
ATGGTGCAAA GCTCGCTCGA CCTTGAAACA AGCCGCCTGC ACGCAGCGGC TCGTTGA
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| Protein sequence | MSRKRHEPDR TAPAPRQADA QLLPTLFDRL RDDAPHRQTE SPGDYAVSRA QMRDIIQRDL
AFLLNATSME DLIDRKRHSY AAASTINFGV PPLAGAFMAS HKWAKIEEVI RGAIRDFEPR
LIAHTVQVVP LTDVDSQSRY NHLAFEIRGM IHMDPYPLEF MVQSSLDLET SRLHAAAR
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