| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0941 |
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| Symbol | |
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| ID | 6280941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1058476 |
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| End bp | 1059021 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620501 |
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| Product | type VI secretion protein, VC_A0107 family |
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| Protein accession | YP_001894584 |
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| Protein GI | 187922942 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGTTT CAAACAGTTC GCAGAAGTTC ATCGCGCGCA ACCGTGCGCC GCGCGTCCAG
ATCGAGTACG ACGTCGAGAT CTACGGTTCC GAGAAAAAGG TAGAACTGCC ATTCGTGATG
GGCGTGCTTG CCGATCTATC CGGCAAGCCG GTCGAACCGC TGCCGGCTGT CGCCGACCGC
CGCTTCCTCG ACATCGATAT CGACAACTTC GACGAGCGCA TGAAAGCGCT CAAGCCACGC
GTCGCATTCG CGGTGCCCAA TACGCTCACG GGCGAGGGCC AATTAATGGT CGACATGACA
TTCGAAAGCA TGGAGGACTT CTCGCCGGCC GCCGTCGCCA GCAAGGTCCA GCCCTTGCAT
CGCCTGCTCG ACGCGCGTAC GCAACTGGCC AATCTGCAAA CCTATATGGA CGGCAAGTCC
GGCGCCGAAG CGCTCGTCAA CAAGCTGCTG GCTGATCCAG CCTTGCTGAA GGCGCTCACC
GCCGTGCCGA AGCCGAAGGT TATCGACGAG ACAGAACACA ACCATACCGA CAAGGCGTCG
AACTGA
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| Protein sequence | MSVSNSSQKF IARNRAPRVQ IEYDVEIYGS EKKVELPFVM GVLADLSGKP VEPLPAVADR
RFLDIDIDNF DERMKALKPR VAFAVPNTLT GEGQLMVDMT FESMEDFSPA AVASKVQPLH
RLLDARTQLA NLQTYMDGKS GAEALVNKLL ADPALLKALT AVPKPKVIDE TEHNHTDKAS
N
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