| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0940 |
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| Symbol | |
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| ID | 6280940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1056906 |
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| End bp | 1058405 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620500 |
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| Product | type VI secretion protein, EvpB/VC_A0108 family |
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| Protein accession | YP_001894583 |
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| Protein GI | 187922941 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.205966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC AGCAGGTAAA GGCAACGGCA AGCGCAACTG CCGCGCATTC ACAGACCGAC
TTTTCGCAGT TGCTCGCGCA GGAATTTCGC CCCAAGACCG CCGCGGCTCG GGACGCCGTC
GAATATGCGG TTCAAACGCT GGCCGAGCAG GCGCTGCAGC AGTCGATCAT CATCAGCGAC
GACGCGTACA AGAGCATTGA AGCGATCATC GCGCAAATCG ATCACAAGCT GTCGGAGCAG
ATCAACCTGA TCCTCCACCA CAACGATTTC CAGAAACTGG AATCGGCGTG GCGCGGTCTG
CATCATCTGG TGTCGAACAC CGAAACGGAC GAGCGGCTGA AGATCCGCTT CATGGACGTT
TCGAAGGAGG AACTGCGTCG CACGATGAAG CGCTACAAGG GCCTCGCATG GGATCAGAGT
CCGCTCTTCA AGCAGATTTA CGAAGAGGAA TATGGCCAGC TCGGCGGCGA ACCGTACGGC
TGCCTTGTTG CTGACTATTA CTTCGACCAC ACACCGCCCG ACGTCGACCT GCTCGGCTCG
ATTGCCAAAA TCTCCGCAGC CGCGCATACG CCGTTCATCT CGGGGGCCTC GCCCTCGGTG
CTGCAGATGG AGTCGTGGCA GGAACTCGCC AACCCGCGCG ATCTGACGAA AATCTTCGCG
CAAAATCTCG AGTACGCGCC GTGGAATTCC CTGCGCAATA CGGAAGATGC GCGCTATATC
GGGCTCGCAA TGCCGCGCTT CCTGTCGCGT CTGCCGTATG GCGCTCAGAC GAACCCGGTC
GATGAATTCG ATTTCGAGGA AGACACCAAC GGTCCAGATC ACCGCAACTA TGCGTGGGCC
AATGCCGCGT ACGCCATGGG CGTGAACATC AACCGGTCGT TCAAGCTGTA TGGCTGGTGC
TCGCTGATTC GCGGCGTCGA GTCGGGCGGC ACGGTCGAGA GCTTGCCGTG CCACACGTTC
CCGACCGATG ACGGCGGCAT CGACATGAAG TGCCCGACGG AAATCGCAAT CTCGGACCGT
CGCGAAGCCG AACTGTCGAA GAACGGTTTT ATTCCGCTCG TGCACCGTAA AAACACCGAC
CACGCGACCT TCATCGGTGC CCAATCGGTG CAGAAGCCCG CCGAATACCA CGATCCGGAT
GCGACTGCCA ACGCCAACCT GTCGGCGCGT CTACCGTATC TGTTCGCCTG CTCGCGATTC
GCGCACTACC TGAAGTGCAT TGTGCGCGAC AAGATCGGGA CGTTCCGCGA GCGCGAGGAT
ATGCAGCGCT GGCTCAACGA ATGGATCATG AACTACGTCG ACGCGGACCC GGCGAATTCA
TCGCAGGAAA CCAAAGCACG CCGCCCGCTG GCGGCAGCCG AAGTGGTCGT CGAGGATGTC
GAAGGCAACC CCGGCTACTA CCAGGCGAAG TTCTTCCTGC GCCCGCACTT CCAGCTCGAA
GGCCTCACGG TGTCGCTGCG TCTTGTTGCG CGGCTGCCTT CCGTGAAGGA AGCGGCCTGA
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| Protein sequence | MTTQQVKATA SATAAHSQTD FSQLLAQEFR PKTAAARDAV EYAVQTLAEQ ALQQSIIISD
DAYKSIEAII AQIDHKLSEQ INLILHHNDF QKLESAWRGL HHLVSNTETD ERLKIRFMDV
SKEELRRTMK RYKGLAWDQS PLFKQIYEEE YGQLGGEPYG CLVADYYFDH TPPDVDLLGS
IAKISAAAHT PFISGASPSV LQMESWQELA NPRDLTKIFA QNLEYAPWNS LRNTEDARYI
GLAMPRFLSR LPYGAQTNPV DEFDFEEDTN GPDHRNYAWA NAAYAMGVNI NRSFKLYGWC
SLIRGVESGG TVESLPCHTF PTDDGGIDMK CPTEIAISDR REAELSKNGF IPLVHRKNTD
HATFIGAQSV QKPAEYHDPD ATANANLSAR LPYLFACSRF AHYLKCIVRD KIGTFRERED
MQRWLNEWIM NYVDADPANS SQETKARRPL AAAEVVVEDV EGNPGYYQAK FFLRPHFQLE
GLTVSLRLVA RLPSVKEAA
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