| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0938 |
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| Symbol | |
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| ID | 6284532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1055671 |
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| End bp | 1056153 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642620498 |
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| Product | protein of unknown function DUF796 |
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| Protein accession | YP_001894581 |
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| Protein GI | 187922939 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.124942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACAGG ACATTTTTAT CAAGATCAAC GGGATCGACG GCGAATCGCA GGATTCGGCG
CACAAGAACG AAATCGAAGT GGCGAGCTGG GGCTGGCAAA TCCTGCAGCA GTCGAACATG
CACATGGGTT CGGGCGGCGG CGCGGGTAAG GCAACTGTCG AAGACCTGGC GTTCGAACAC
CTGGTCGATC GTGCAAGCCC GAACCTGATG AAGTATTGCC TGACCGGCAA GCACATCGAT
CAGGCCGTGC TGACCGTGCG CAAGGCCGGC GGCAATCCGC TCGAATACCT GAAGATCACG
ATGAACGACG TCATCGTTAC GCAGGTTCAT CCGTCGGGCA GCAACGCTGA CAACGGCATC
CGTGAACAGG TGCGCCTGTC GTTCGCGAAG GTCAAGCAGG AATACGTCGT GCAGAACGCC
CAGGGCGGCA GTGGCGGCGC CGTGACGGCA GGCTACGACA TCAAGCTCAA CAAGGAAGCT
TAA
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| Protein sequence | MAQDIFIKIN GIDGESQDSA HKNEIEVASW GWQILQQSNM HMGSGGGAGK ATVEDLAFEH
LVDRASPNLM KYCLTGKHID QAVLTVRKAG GNPLEYLKIT MNDVIVTQVH PSGSNADNGI
REQVRLSFAK VKQEYVVQNA QGGSGGAVTA GYDIKLNKEA
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