| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0787 |
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| Symbol | |
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| ID | 6283080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 865817 |
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| End bp | 866815 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620351 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001894434 |
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| Protein GI | 187922792 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.201848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGA TCCTGTTCAG CAGCCGCCAA TACGACCGTG ACACATTCAC CGAAGCCAAT
GCCACGCATC GCTATGAGTT GCACTGCCAG GAGTCGCACC TCGACAGCGA GACGGCCATT
CTCGCGCAGG GCTACGACGT GGTGTGTCCG TTCGTCAACG ACAACGTCGA CGCGGCGGTC
CTTGCGCGGC TTCATGCCGG CGGCACGCGC ATGATCGCGC TGCGCTCGGC GGGTTTCAAT
CACGTCGACC TCGCCGCGGC TGAGCGCCTC GGCATCACGG TCGCGCGGGT GCCGGCCTAT
TCGCCGCACG CGGTGGCCGA ACATGCGGTC GGCTTGATTC TGGCGCTGAA TCGGCGGTTG
CCGCGCGCTG TCGCACGTAC GCGCGAAGGC GACTTTTCGC TGCACGGTCT GCTCGGTTTC
GATCTGCATG GCAAGACCGT GGGCGTGATC GGCACCGGCA TGATCGGCCG CGTATTCGGG
CGCATCATGG CGGGCTTTGG CATGCAGGTG CTCGCGTACG ATCCGGGCAA GCCCGCCGCC
GATCTGCTCG CGCTCGGCGC CCGCTACGTG CCGCTCGACG CGCTGCTCGC CGAGTCCGAC
GTGGTCAGCC TGCATTGTCC GCTGGTGCCC GACACGTACC ATCTCATCAA CGGCCCCGCG
CTCGCCAAGA TGAAGCGCGG CGCGATGCTG ATCAATACGG GCCGTGGCGG CCTAGTCGAA
AGCAATGCGC TGATCGGCGC CCTGAAGGAC GGCCAGCTCG GCCATCTTGG GCTAGACGTG
TACGAGGAAG AAAGTGGCCT GTTCTTCGAG GATCACTCGA ACTTGCCTTT GCAGGACGAT
GTGCTCGCGC GTCTGTTGAT GTTCCCGAAC GTGATCGTCA CCGCGCATCA GGCGTTCTTC
ACGCGCGAGG CGATGAACGA GATCGCCCAG ACCACGCTCG ATAACGTCGC GGCCTGGCAA
GCCGGCACGC CGCGCAATGT GGTGCGCGCG CCCGCCTAG
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| Protein sequence | MRMILFSSRQ YDRDTFTEAN ATHRYELHCQ ESHLDSETAI LAQGYDVVCP FVNDNVDAAV
LARLHAGGTR MIALRSAGFN HVDLAAAERL GITVARVPAY SPHAVAEHAV GLILALNRRL
PRAVARTREG DFSLHGLLGF DLHGKTVGVI GTGMIGRVFG RIMAGFGMQV LAYDPGKPAA
DLLALGARYV PLDALLAESD VVSLHCPLVP DTYHLINGPA LAKMKRGAML INTGRGGLVE
SNALIGALKD GQLGHLGLDV YEEESGLFFE DHSNLPLQDD VLARLLMFPN VIVTAHQAFF
TREAMNEIAQ TTLDNVAAWQ AGTPRNVVRA PA
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