Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0764 |
Symbol | |
ID | 6284270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 844006 |
End bp | 844752 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620328 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001894411 |
Protein GI | 187922769 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.467056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.141575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTGT TCGTCACCGG AGCGTCCGCC GGATTCGGCG CCGCCATCGC TCGCGCCTTC GTCAAAGGCG GCCATCGCGT CGTCGCCACC GCTCGCCGCA AGGACCGCCT GCAAGAGCTC GCCGACGAAC TCGGCGACGC GCTTCTGCCG TACGAGCTCG ACGTGCGCGA CCGCGCCGCC GTCGAAGCCG TGCCGGCCTC GCTGCCGGCC GACTTCGCCG CCATCGACGT GCTGGTCAAC AATGCCGGCC TCGCGCTCGG CATCGAACCG GCGCAGAAAG CGAGTCTCGA CGAATGGAAC ACCATGATCG AGACCAACTG CACGGGGCTC GTTCAGGTAA CGCACGCGCT CCTGCCCGGC ATGGTGGAAC GCAATCGCGG CCACATTTTC AATCTCGGCT CGGCCGCCGG CAGCTGGCCT TACGCGGGCG GCAACGTCTA CGGGGCCACC AAAGCGTTCG TGCATCAGTT CAGCCTGAAT CTGCGCGCCG ATGTGGCCGG CACCGCGCTG CGGGTGACGA ACGTCGAGCC CGGCCTGTGC GGCGGCACCG AGTTTTCGAA CGTGCGATTT CGCGGCGACG ACGTGAAGGC CGGCAAAATG TACGAAAACG TGCAGCCGCT GACGCCCGAC GACATCGCCG ACTCGATCTA CTGGATCGCC ACGCGCCCCG CGCACGTCAA CATCAACACG ATCGAACTGA TGCCGGTGGC TCAATCGTTC TCCGCCTTGT CCGTGCATCG CGGCTGA
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Protein sequence | MIVFVTGASA GFGAAIARAF VKGGHRVVAT ARRKDRLQEL ADELGDALLP YELDVRDRAA VEAVPASLPA DFAAIDVLVN NAGLALGIEP AQKASLDEWN TMIETNCTGL VQVTHALLPG MVERNRGHIF NLGSAAGSWP YAGGNVYGAT KAFVHQFSLN LRADVAGTAL RVTNVEPGLC GGTEFSNVRF RGDDVKAGKM YENVQPLTPD DIADSIYWIA TRPAHVNINT IELMPVAQSF SALSVHRG
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