| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0709 |
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| Symbol | |
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| ID | 6281733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 779249 |
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| End bp | 780907 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620273 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001894357 |
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| Protein GI | 187922715 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.381837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCC CGCAAGAACC GACGCCCGCC TCCGATGCGC CGCGCAACGA TTCGAACGGA
CCGAAGCTGC CGCCCCAACT CCCGGACCCT GAAATCGAGC CGCGCAGCCG CTGGCTGCCT
TCGCTCGTCT GGATGATTCC GCTGATCGCC GCGCTGATCG GCATCGCGCT CGTGATCAAG
TCGGTGACCG CAAGAGGTCC GACCATCACG ATCAGCTTTG TGAGCGCTGA AGGTCTCGAA
CCCGGCAAGA CCAAGGTGAA GTACAAAGAC GTCGATGTGG GCTCGGTGAA GACCATCACG
CTGTCGAAAG ATCTGTCCCA CGTGCTGGTG CAGGTGCAGT TGACCAAGGA AGGCGAAGAC
TTCGCGGTCA AGGATTCGCG TTTCTGGGTG GTGCGGCCGC GCGTCGGCGC GAGCGGCGTG
TCGGGTCTTA CCACGCTGCT CTCGGGCGCG TATATCGGCG CGGATGCGGG GCATTCGCCG
GATACCGAGA AGAACTTCGT CGGCCTCGAA ACGCCGCCGC CTATTACCGG CGACCAGAAG
GGCCACCAGT TCGTCCTGCA CGGCGACTCG CTCGGCTCGA TCGACATCGG CTCGCCGATC
TTCTACCGGC GCGTGCAGGT CGGCCAGGTG GTCGGCTTCT CGCTCGACAA GGACGGCACC
GGCGTGACCA TGCAGGTCTT CGTGTCCGCG CCGTTCGATC AATACGTCGG CACCAATTCG
CGCTGGTGGC ATGCGAGCGG TGTCGATCTG CGGCTCGACT CCAGCGGCTT CAAGCTGAAC
ACGCAGTCGC TTGCCACGGT GATCGTCGGC GGCTTGTCGT TCCAGTCGCC GCCGGGTCAG
GGCGTGGGCG CGCAGGCACC GAACAACATG ACGTTCCGCC TCGGCTCGGA CGAAGCGGAT
GCGATGCGCG AACCGGACGG CGTGCCGCTG CGTGTGGTGA TGAACTTCAA CCAGTCGCTG
CGTGGTTTGT CGATCGGCGC GCCGGTCGAT TTCCGTGGCA TCGTGCTCGG CCAGGTGACC
AATATCGGCA TCGACTACGA TCCGAAGACC CGCAGCTTCA CTATGCCGGT GACGATGAAC
CTGTACCCCG ACCGCCTCGG CAGGCGCTTC CGCGAAACCG CGCCGGCACC GGGCAGCCTC
GCGGGTCAAA CCATGCTGCA GCAGCTCGTC AAACATGGTC TGCGTGGCCA GTTGCGCACC
GGCAACCTGA TTACGAGCCA GTTGTACGTG GCGGTGGATA TCTTCCCGAA AGCGCCGCCG
GCAACCGTCG ACGTGGCGAG CGATCCGCTC GAACTGCCGA CGATTCCGAA CACGCTCGAC
GAGTTGCAGC TCCAGGTCGC CGACATTGCG AAGAAGCTCG ACAAGGTGCC GTTCGATCAG
ATCGGCAACA ACCTGAACAG CGCGCTGAAG AACGCCGACC AACTCTTCAC GCGACTCGAC
AAGGAAGTCG TGCCGCAGGC TCGCGACACC CTCGCCGCGG CGAAGCAGAC CTTTGGTTCG
GCCGAGGCGA CGTTGCAGCA GGACTCGCCG TTGCAGTCGG ATGTTCATCA GGCGTTGCAG
GAATTGACGC GCACGTTGCA GTCGTTGAAT GCGCTGTCGG ATTATCTGGA ACGCCACCCC
GAATCGCTGT TGCGGGGTAA ATCAGGAGAT AAACCATGA
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| Protein sequence | MTSPQEPTPA SDAPRNDSNG PKLPPQLPDP EIEPRSRWLP SLVWMIPLIA ALIGIALVIK
SVTARGPTIT ISFVSAEGLE PGKTKVKYKD VDVGSVKTIT LSKDLSHVLV QVQLTKEGED
FAVKDSRFWV VRPRVGASGV SGLTTLLSGA YIGADAGHSP DTEKNFVGLE TPPPITGDQK
GHQFVLHGDS LGSIDIGSPI FYRRVQVGQV VGFSLDKDGT GVTMQVFVSA PFDQYVGTNS
RWWHASGVDL RLDSSGFKLN TQSLATVIVG GLSFQSPPGQ GVGAQAPNNM TFRLGSDEAD
AMREPDGVPL RVVMNFNQSL RGLSIGAPVD FRGIVLGQVT NIGIDYDPKT RSFTMPVTMN
LYPDRLGRRF RETAPAPGSL AGQTMLQQLV KHGLRGQLRT GNLITSQLYV AVDIFPKAPP
ATVDVASDPL ELPTIPNTLD ELQLQVADIA KKLDKVPFDQ IGNNLNSALK NADQLFTRLD
KEVVPQARDT LAAAKQTFGS AEATLQQDSP LQSDVHQALQ ELTRTLQSLN ALSDYLERHP
ESLLRGKSGD KP
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