Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0677 |
Symbol | pdxA |
ID | 6283635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 743953 |
End bp | 744963 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642620241 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001894325 |
Protein GI | 187922683 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAGCG CCACCCAGTC CGCCCGCCCA CCGCTGCAGA TCGCGATCAC GACCGGCGAG CCCGCCGGCG TCGGTCCCGA ATTGACAGTG CAGGCGCTGG CGGGCGCGGC GGCGCATTGG CCGCACGCGC AGTTCACCGT GCTGGGCGAC GCCGGCCTGC TCGCCGAACG CGCGCGGGCC GTGGGCGTCG ACTGGAGCGC GCTGGTCGCG GACGGCAAAC GCGTGCGCCT CCAGCACCGG CCGCTCGGAG CGCCTGCCGT TGCGGGCAAG CTCAACGCGG CCAACGGCCG CTACGTGCTC GACCTGCTCG ACAGAGCGAT CGATGGCGCG GTAGCCGGCA CGTTCGACGC GATCGTCACT GCGCCGCTGC AAAAGAGCAC CATCAACGAT GCCGGCGTGC CGTTCACCGG CCACACCGAA TATCTCGCCG AGCGCACGCA CACGCCGCGC GTGGTGATGA TGCTGGCCGG CACCGGCAAG CGCCCGTTGC GCGTCGCACT GGCGACCACG CATCTGCCGC TCAAGGATGT GTCCGCCGCG TTGTCCATCG AAGGCATTGT CGAGACGCTG CGCATCATCG ATCACGATTT GCGGCATCAC TTCGGCTTGC CGGCGCCGCG CATCCTCGTG ACGGGGCTGA ACCCGCACGC GGGCGAAAAC GGTTATCTCG GCCGCGAGGA AATCGATGTC ATCACACCGG CGCTGAAGCT CGCGGACGCT CAAGGCATCG ACGCGCGCGG TCCGTATCCG GCCGACACGC TGTTCCAGCC GCGTTATCTG GACGAGGCCG ATTGCGTGCT GGCCATGTTC CACGACCAGG GCCTGCCGGT ATTGAAGTAC GCCACGTTCG GCGAAGGCAT CAATGTCACG CTCGGTTTGC CGATCATCCG CACGTCGGTC GATCACGGCA CCGCGCTCGA CCTGGCCGGC ACCGGCCGCG CCGACGCGGG CAGCCTGATC GCCGCGATCG AGACGGCGGT GTCGATGGCG CAGCACCGCC GCGCGGGCTG A
|
Protein sequence | MTSATQSARP PLQIAITTGE PAGVGPELTV QALAGAAAHW PHAQFTVLGD AGLLAERARA VGVDWSALVA DGKRVRLQHR PLGAPAVAGK LNAANGRYVL DLLDRAIDGA VAGTFDAIVT APLQKSTIND AGVPFTGHTE YLAERTHTPR VVMMLAGTGK RPLRVALATT HLPLKDVSAA LSIEGIVETL RIIDHDLRHH FGLPAPRILV TGLNPHAGEN GYLGREEIDV ITPALKLADA QGIDARGPYP ADTLFQPRYL DEADCVLAMF HDQGLPVLKY ATFGEGINVT LGLPIIRTSV DHGTALDLAG TGRADAGSLI AAIETAVSMA QHRRAG
|
| |