| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0654 |
|---|
| Symbol | |
|---|
| ID | 6282225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 715095 |
|---|
| End bp | 715472 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642620219 |
|---|
| Product | regulatory protein, FmdB family |
|---|
| Protein accession | YP_001894303 |
|---|
| Protein GI | 187922661 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.257627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCT ACGCTTATCG TTGCGAATCA TGCGGCTTCG GGAAGGACGT GCTTCAGAAG
ATCAGCGACC CGCAATTGAC GCAGTGTCCT GAGTGCGGGA AAGACACATT TCGCAAGCAG
GTCACGGCCG CCGGCTTCCA GTTGAAGGGC TCCGGCTGGT ACGTGACCGA CTTTCGCGGC
GGCAACGGCG GCGCGAGCGC GCCGGCCAAG CCCGACGCCA ACGGCGCCTC GAATGGCGCC
TCCGGCGAGA GCGCGAGCGC CAATAACGGC GCCACGCAAT CCGACGCGGC GCCGGCCAGC
AGCACGGCTG CGACGCCGTC CGCGCCTGCT GCCGCACCAG CCGCTTCGGC GAGTTCGAGC
GGTTCCGGCA GCACCTAG
|
|---|
| Protein sequence | MPIYAYRCES CGFGKDVLQK ISDPQLTQCP ECGKDTFRKQ VTAAGFQLKG SGWYVTDFRG
GNGGASAPAK PDANGASNGA SGESASANNG ATQSDAAPAS STAATPSAPA AAPAASASSS
GSGST
|
|---|
| |